Table 1 EST sequence summary of 25 positive R. flavipes clones identified from array screens
From: Caste- and development-associated gene expression in a lower termite
Clone * | Size (bp) | Identity match by BLASTx (%) | E-value | Gene ontogeny†|
1 (D04) | 615 | 98% to Reticulitermes speratus salivary cellulase | 1e-106 | E |
2 (C02) | 423 | 89% to Reticulitermes speratus endoglucanase 2 | 1e-79 | E |
3 (E11) | 505 | 57% to Pseudotrichonympha grassii cellulase | 7e-69 | E |
4 (B02) | 518 | 87% to Blattella germanica cytochrome oxidase I | 7e-54 | ET |
5 (A10) | 449 | Unknown (65% to Anopheles gambiae unknown) | 2e-49 | UNK |
6 (C07) | 505 | >65% to Drosophila melanogaster β-NAC homolog, 'bicaudal' | 2e-45 | TF |
7 (B09) | 585 | 69% to Holomastigotoides mirabile endoglucanase 2 | 1e-47 | E |
8 (C11) | 509 | 69% to Drosophila melanogaster muscle-specific 'LIM' protein | 2e-35 | CSP |
9 (B11) | 569 | 80% to Drosophila melanogaster troponin I 'wings up' | 1e-35 | CSP |
10 (H04) | 242 | 98% to Bombyx mori β-tubulin | 6e-33 | CSP |
11 (D10) | 499 | 39% to Drosophila melanogaster troponin I 'wings apart', 'heldup' | 3e-29 | CSP |
12 (F10) | 527 | 36% to Athalia rosae vitellogenin | 4e-20 | SP |
13 (D03) | 387 | >64% to Drosophila melanogaster 'BAB-I' (BTB/POZ domain containing protein) | 3e-18 | TF |
14 (G12) | 296 | 81% to Drosophila melanogaster mitochondrial-ribosomal protein S2 | 1e-17 | MOB |
15 (G03) | 340 | 49% to Mus musculus SH3-domain kinase binding protein | 5e-10 | ST |
16 (D02) | 645 | 43% to Homo sapiens Rab3 GTPase-activating protein | 2e-8 | ST |
17 (H08) | 297 | 39% to Caenorhabtidis elegans RNA-dependent DNA polymerase (RTase) | 0.001 | DRF |
18 (B10) | 350 | Unknown (40% to Drosophila melanogaster GC1077 gene product) | 0.03 | UNK |
19 (A05) | 630 | 38% to goldfish mitochondrion hypothetical 18K protein | 0.12 | MOB |
20 (D07) | 471 | 44% to Oncorhyncus mykiss cyclic GMP-gated channel | 0.39 | IC |
21 (H06) | 632 | 27% to Musca domestica nanos posterior determinant homolog | 1.2 | TF |
22 (E12) | 372 | 34% to Moraxella bovis endonuclease Mbo II | 3.2 | DRF |
23 (G06) | 370 | Unknown (36% to Anopheles gambiae unknown) | >5 | UNK |
24 (A02) | 510 | Unknown | >5 | UNK |
25 (E03) | 392 | Unknown | >5 | UNK |