Table 1 Arabidopsis 70-mer oligonucleotide probes
From: Assessing unmodified 70-mer oligonucleotide probe performance on glass-slide microarrays
Abbreviation | Complete gene name | GenBank accession number | 70-mer sequence |
|---|---|---|---|
RCP1 | Root cap 1 protein | AF168390 | 5'-AACAGTATCTTGCCTGGGACAACTGCTTTTGGTATTGCTGTGGCAGCTATAATCATGGCTCGAACTGGGA-3' |
Cab | Photosystem I chlorophyll | X56062 | 5'-TGCTCGCTGTTCCTGGGATTTTGGTACCAGAAGCATTAGGATATGGAAACTGGGTTAAGGCTCAGGAATG-3' |
A/B-binding protein | |||
TIM | Triosephosphate isomerase | AF247559 | 5'-GAACAGCTCAAAGACCTTGGCTGCAAGTGGGTCATTCTTGGGCATTCCGAACGGAGACATGTCATCGGAG-3' |
Ltp4 | Lipid transfer protein 4 | AF159801 | 5'-AGTCCATGTCTAGGCTACCTATCGAAGGGTGGGGTGGTGCCACCTCCGTGCTGTGCAGGAGTCAAAAAGT-3' |
PRKase | Ribulose-5-phosphate kinase | X58149 | 5'-CAAACCAACCGGAGATTCAACACACTCATCACTTGCGCACAAGAAACCATCGTGATCGGACTAGCTGCTG-3' |
Ltp6 | Lipid transfer protein 6 | AF159803 | 5'-GCCGTGTGCCTGGTTCTTGCTTTACACTGCGGTGAAGCAGCCGTGTCTTGCAACACGGTGATTGCGGATC-3' |
rbcL | Ribulose-1,5-bisphosphate carboxylase/oxygenase, large subunit | ATU91966 | 5'-AGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGCCT TGATCGTTAC-3' |
Ra | Rubisco activase | X14212 | 5'-ACGCTGGTGCGGGTCGTATGGGTGGTACTACTCAGTACACTGTCAACAACCAGATGGTTAACGCAACACT-3' |
XCP2 | Papain-type cysteine endopeptidase | AF191028 | 5'-GCTTCTTCCCACGATTACTCCATCGTTGGATACTCCCCCGAGGATTTGGAATCTCATGACAAACTCATAG-3' |
NAC1 | NAM-like protein | AF198054 | 5'-GCCTCTGCATCGCTTCCTCCACTGATGGATCCTTACATCAACTTTGACCAAGAACCCTCTTCTTATCTCA-3' |