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Table 4 Messenger RNA or protein sequences differentially expressed in ceramide-dependent apoptosis

From: Identification of genes involved in ceramide-dependent neuronal apoptosis using cDNA arrays

Clone ID

GENX

GenBank accession number

Unigene

C. int.

C. SD

S. int.

S. SD

Ratio

Similarity

Upregulated clones

   yg51f11

229

R21710

Hs.64691

1.32

0.16

6.34

0.43

4.80

KIAA0483 protein

   yg30b04

5093

R44721

Hs.12896

1.31

0.12

5.99

0.29

4.57

KIAA1034 protein

   yf53g09

13

R12046

Hs.90424

1.56

0.10

7.09

0.67

4.55

Homo sapiens cDNA: FLJ23285 fis, clone HEP09071

   yc94b11

223

F13362; T77404

Hs.101375

1.40

0.15

6.38

1.10

4.55

cDNA DKFZp434H205 (from clone DKFZp434H205)

   yg37d06

2008

R19640

Hs.264636

1.70

0.39

7.39

1.60

4.34

KIAA0781 protein

   yf75c06

425

R13300; R40783

Hs.26409

0.83

0.18

3.55

0.67

4.27

cDNA DKFZp547K204 (from clone DKFZp547K204)

   yf79e07

2479

R14269; R40562

Hs.19150

0.93

0.15

3.91

0.25

4.22

cDNA DKFZp564A2164 (from clone DKFZp564A2164)

   yf49e01

6657

R11708

Hs.21710

1.64

0.20

6.61

1.00

4.04

Hypothetical protein DKFZp761G0313

   yg07h12

200578

R22668

Hs.7734

1.00

0.09

3.71

0.56

3.70

H. sapiens cDNA: FLJ21380 fis, clone COL03329

   yg32e10

5469

R23681

Hs.106825

1.38

0.15

5.09

0.55

3.68

Hypothetical protein FLJ20300

   yf90d07

6203

R15369; R42110

Hs.323396

1.28

0.20

4.66

0.41

3.63

Hypothetical protein RP1-317E23 (LOC56181)

   yg91g03

1624

R56083; R56195

Hs272814

0.83

0.15

2.89

0.30

3.48

Chromosome 20 open reading frame 67

   yg11e11

2086

R17284

Hs.106210

4.25

0.56

14.04

2.67

3.30

Hypothetical protein FLJ10813

   ym11b06

6715

H11788

Hs.125034

1.98

0.16

6.52

0.85

3.29

H. sapiens cDNA FLJ10733 fis, clone NT2RP3001392

   yf80c08

772

R14304; R40254

Hs.59236

1.21

0.25

3.94

0.63

3.24

Hypothetical protein DKFZp434L0718

   yg18e11

4391

R20224

Hs.41185

3.49

0.86

11.27

1.23

3.23

cDNA DKFZp564O1262 (from clone DKFZp564O1262)

   yc90h10

1343

F13218; T75433

Hs.141003

1.32

0.24

4.19

1.05

3.18

H. sapiens cDNA: FLJ21691 fis, clone COL09555

   yg42a11

200671

R24764; R45496

Hs.288368

0.45

0.10

1.41

0.11

3.14

H. sapiens cDNA: FLJ21314 fis, clone COL02248

   yc85f03

255

F12760; T74722

Hs.318401

3.03

0.42

9.46

0.80

3.12

HSPC039 protein (LOC51124)

   yc86g12

32

F12859; T75226

Hs.180948

4.61

0.28

14.27

1.89

3.10

KIAA0729 protein

   c-2lb03

1917

Z45263

Hs.155182

6.48

1.55

19.98

3.34

3.08

KIAA1036 protein

   yf94d09

2836

R16328; R41404

Hs.6343; HS.306400

3.16

0.48

9.58

0.97

3.03

KIAA1464 protein

   yf49g10

2696

R11887

Hs.40094

4.42

0.68

13.38

1.70

3.03

Human DNA sequence from clone 167A19 on chromosome 1p32.1-33

   yg67h02

1136

R35733; R49366

Hs. 325825

3.76

0.34

11.27

0.80

3.00

H. sapiens cDNA: FLJ20848 fis, clone ADKA01732

   yc89d09

2388

F13194; T75317

Hs.22109

3.52

0.07

10.11

1.40

2.87

KIAA0945 protein

   yf72d11

4469

R13137; R40616

Hs.6311

2.38

0.54

6.80

0.92

2.86

H. sapiens cDNA: FLJ20859 fis, clone ADKA01617

   yg73c09

51540

R51740

Hs.288959

1.31

0.18

3.70

0.65

2.83

H. sapiens cDNA: FLJ20920 fis, clone ADSE00877

   yf50h09

9583

R11919;

Hs.11637

3.87

0.33

10.71

1.31

2.77

H. sapiens mRNA; cDNA DKFZp547J125 (from clone DKFZp547J125)

   c-2ba02

4345

Z41723; Z44845

Hs.15921

1.93

0.37

5.31

1.02

2.75

Hypothetical protein FLJ10759

   yg36f12

11000

R25011; R45019

Hs.118983

1.13

0.27

3.00

0.46

2.65

H. sapiens cDNA FLJ12150 fis, clone MAMMA1000422

   c-24b10

1689

Z44563

Hs.154919

2.67

0.43

6.60

1.44

2.47

KIAA0625 protein

   yf76a11

1849

R13420; R40930

Hs.7822

1.12

0.09

2.73

0.33

2.43

cDNA DKFZp564C1216 (from clone DKFZp564C1216)

   yc91c07

162

F10758; F13156

Hs.140833

0.61

0.14

1.46

0.32

2.41

H. sapiens mRNA full length insert cDNA clone EUROIMAGE 29222

   yc94c08

4310

R38361; T77413

Hs.119004

0.53

0.05

1.25

0.22

2.36

KIAA0665 gene product

   yg57f04

3072

R34427; R48960

Hs.326416

0.90

0.16

1.98

0.35

2.20

cDNA DKFZp564H1916 (from clone DKFZp564H1916)

   yg15g12

5559

R18075; R42970

Hs.22370

0.66

0.14

1.45

0.21

2.19

cDNA DKFZp564O0122 (from clone DKFZp564O0122)

   yg97d02

1018

R59194; R59252

Hs.5324

0.64

0.07

1.32

0.16

2.06

Hypothetical protein (CL25022)

   yc95f04

3851

F13386; R39459

Hs.7888

0.58

0.07

1.16

0.25

2.02

H. sapiens clone 23736 mRNA sequence

Downregulated clones

   yg42e05

4312

R45416; R25077

Hs.169330

1.05

0.23

0.52

0.05

0.49

Neuronal protein (NP25)

   yg89f11

2081

R55970; R55969

Hs.16443

1.16

0.27

0.56

0.06

0.49

H. sapiens cDNA: FLJ21721 fis, clone COLF0381

   yg33e09

5446

R20455; R44158

Hs.333389

1.39

0.19

0.67

0.17

0.48

Hypothetical protein MGC13090

   c-2aa11

1485

Z40609; Z44824

Hs.13485

1.44

0.23

0.70

0.16

0.48

KIAA1918 protein

   yf65e06

5690

R13865; R37007

Hs.301685

1.03

0.21

ND

ND

0.48

KIAA0620 protein

   yl76d07

37588

H05960; H06010

Hs.92418; Hs.63510

3.95

0.73

1.85

0.18

0.47

KIAA0141

   c-2cg09

201091

F03885; F07635

Hs.288361

1.06

0.10

0.49

0.02

0.47

H. sapiens cDNA: FLJ22696 fis, clone HSI11696

   yg64h02

2829

R35543; R51112

Hs.12239

2.94

0.61

1.35

0.30

0.46

CGI-10 protein (LOC51004)

   yf49c08

23982

R11699; R17677

Hs.322844

1.29

0.32

0.58

0.12

0.45

Hypothetical protein DKFZp564A176

   yg33g08

636

R20203; R44989

Hs.7750

8.39

1.43

3.60

0.64

0.43

Novel human gene mapping to chromosome 1

   yf53d08

532

R11837; R36955

Hs.246885

1.07

0.05

0.44

0.08

0.42

Hypothetical protein FLJ20783

   yg65h10

10701

R35431; R49229

Hs.222746

1.04

0.25

0.42

0.09

0.40

KIAA1610 protein

   yg69e11

1257

R36317; R49249

Hs.216958

1.16

0.28

0.44

0.10

0.38

KIAA0194 protein

   yf79f12

5599

R14349; R40677

Hs.179946

2.55

0.37

0.86

0.20

0.34

KIAA1100 protein

   yf86c11

1909

R15181; R41632

Hs.286013

1.06

0.14

0.34

0.08

0.32

Short coiled-coil protein

   yf78c09

1664

R14217; R40635

Hs.351029

10.44

1.29

3.36

0.75

0.32

H. sapiens cDNA FLJ31803 fis, clone NT2RI2009101

   yf61c10

1067

R13997; R39120

Hs.5008; Hs.21515

1.11

0.09

0.35

0.08

0.32

CG-87 protein

   yd06g01

2455

R38891; T81283

Hs.165570

1.41

0.07

0.45

0.10

0.32

H. sapiens clone 25052 mRNA sequence

   yf64f10

111134

R36936

Hs.80285

8.72

0.83

2.76

0.35

0.32

mRNA cDNA DKFZp586C1723 (from clone DKFZp586C1723)

   yc91e03

11140

F13018; T77597

Hs.337629

5.27

1.08

1.67

0.22

0.32

cDNA DKFZp434D115 (from clone DKFZp434D115)

   yf65b02

8918

R13839; R36985

Hs.227913

1.09

0.24

0.32

0.05

0.30

API5-like 1

   yf60a03

1485

R13618; R38474

Hs.13485

2.13

0.36

0.65

0.09

0.30

KIAA1918 protein

   yf56a05

5140

R12419

Hs.7132

1.97

0.33

0.57

0.08

0.29

KIAA0574 protein

   yg78h08

884

R51917; R54309

Hs.6449

1.20

0.28

0.34

0.08

0.28

CGI-87 protein (LOC51112)

   yf69g12

713

R40161

Hs.288776

1.21

0.23

0.29

0.04

0.24

H. sapiens cDNA: FLJ21304 fis, clone COL02111

   yf93b11

2192

R16295; R40219

Hs.108504

1.25

0.16

0.24

0.05

0.20

Hypothetical protein FLJ20113

   yf51g08

2572

R12017; R39856

Hs.20977

1.11

0.20

0.19

0.04

0.17

Human DNA sequence from clone RP5-881L22 on chromosome 20

   yg26c11

904

R19006; R44076

Hs.226396

3.13

0.50

0.35

0.08

0.11

Hypothetical protein FLJ11126

  1. Abbreviations and column headings are as in Table 1.