From: Identification of genes involved in ceramide-dependent neuronal apoptosis using cDNA arrays
Clone ID | GENX | GenBank accession number | Unigene | C. int. | C. SD | S. int. | S. SD | Ratio | Similarity | Gene symbol |
---|---|---|---|---|---|---|---|---|---|---|
Signal transduction | ||||||||||
   yl85b10 | 1842 | H05211 | Hs.22003 | 1.62 | 0.40 | 7.99 | 0.37 | 4.94 | Solute carrier family 6 (neurotransmitter transporter, GABA), member 1 | SLC6A1 |
   yf77g11 | 3900 | R14207; R37490 | Hs.75819 | 1.12 | 0.12 | 5.02 | 0.43 | 4.46 | Glycoprotein M6A | GPM6A |
   yg63f10 | 1552 | R26636; R49665 | Hs.24212 | 1.01 | 0.15 | 4.02 | 0.61 | 3.98 | Latrophilin | KIAA0786 |
   c-2ee07 | 116218 | Z45003 | Hs.107979 | 1.75 | 0.35 | 6.17 | 0.85 | 3.52 | Small membrane protein 1 | SMP1 |
   yf60h11 | 12653 | R13771 | Hs.61628 | 1.43 | 0.18 | 4.68 | 0.61 | 3.28 | Calcium binding atopy-related autoantigen 1 | CBARA1 |
   yf88a09 | 9668 | R15201 | Hs.181326 | 4.01 | 0.50 | 11.65 | 2.01 | 2.90 | Myotubularin-related protein 2 | MTMR2 |
   yg11b08 | 107475 | R17181; R41731 | Hs.5462 | 0.72 | 0.12 | 1.54 | 0.33 | 2.14 | Solute carrier family 4, sodium bicarbonate cotransporter, member 4 | SLC4A4 |
   c-2mh12 | 1997 | Z41050; Z45338 | Hs.108787 | 1.08 | 0.21 | 0.52 | 0.04 | 0.47 | Phosphatidylinositol glycan, class N | PIGN |
   yc87e10 | 115203 | F10343; F12737 | Hs.173717 | 1.24 | 0.17 | 0.50 | 0.06 | 0.40 | Phosphatidic acid phosphatase type 2B | PPAP2B |
   yf48c10 | 9043 | R12286; R12797 | Hs.10842 | 1.10 | 0.24 | 0.43 | 0.03 | 0.39 | RAN, member RAS oncogene family | RAN |
   yd09f12 | 2991 | R39085 | Hs.306359 | 2.39 | 0.46 | 0.90 | 0.22 | 0.38 | Hect domain and RCC1 (CHC1)-like domain (RLD) 1 | HERC1 |
   c-3ie05 | 5307 | F10685; F13091 | Hs.9347 | 1.48 | 0.24 | 0.53 | 0.02 | 0.36 | Regulator of G-protein signaling 14 | RGS14 |
   yg16c08 | 5294 | R17962; R43452 | Hs.1440 | 1.05 | 0.23 | 0.29 | 0.04 | 0.27 | Gamma-aminobutyric acid (GABA) A receptor, beta 3 | GABRB3 |
   yf50c04 | 1366 | R11777; R37698 | Hs.5985 | 1.13 | 0.12 | 0.17 | 0.01 | 0.15 | Non-kinase Cdc42 effector protein SPEC2 | LOC56990 |
Transcription/translation | ||||||||||
   yf71g02 | 5232 | R40420 | Hs.16313 | 0.90 | 0.13 | 2.30 | 0.15 | 2.55 | Kruppel-like zinc-finger protein GLIS2 | GLIS2 |
   c-26a02 | 451 | F07446 | Hs.13993 | 1.64 | 0.38 | 3.39 | 0.73 | 2.07 | TBP-like 1 | TBPL1 |
   c-05c07 | 4917 | Z38284; Z41997 | Hs.26973 | 1.21 | 0.20 | 2.45 | 0.52 | 2.02 | Bromodomain adjacent to zinc-finger domain, 2B | BAZ2B |
   c-24a11 | 114423 | F07382 | Hs.75678 | 1.38 | 0.23 | 0.66 | 0.16 | 0.47 | FBJ murine osteosarcoma viral oncogene homolog B | FOSB |
   yg90e12 | 10904 | R56427; R56428 | Hs.239 | 1.28 | 0.23 | 0.59 | 0.03 | 0.46 | Forkhead box M1 | FOXM1 |
   yf61e03 | 4401 | R13803; R37662 | Hs.182447 | 7.20 | 1.01 | 2.75 | 0.60 | 0.38 | Heterogeneous nuclear ribonucleoprotein C (C1/C2) | HNRPC |
   yf64g02 | 993 | R37803 | Hs.6151 | 4.87 | 0.77 | 1.87 | 0.46 | 0.38 | Pumilio homolog 2 (Drosophila) | PUM2 |
   yg53f10 | 1678 | R62465; R25720 | Hs.520 | 1.41 | 0.20 | ND | ND | 0.35 | Nuclear receptor subfamily 2, group C, member 2 | NR2C2 |
   yg47e10 | 1548 | R21283; R45373 | Hs.14520 | 1.55 | 0.26 | 0.53 | 0.13 | 0.34 | Eukaryotic translation initiation factor 2C, 1 | EIF2C1 |
   yg36d06 | 1872 | R24568; R44373 | Hs.76177 | 10.91 | 1.23 | 3.67 | 0.10 | 0.34 | Transcription factor CP2 | TFCP2 |
   yg60b12 | 303 | R35123; R49511 | Hs.2186 | 3.12 | 0.63 | 0.94 | 0.07 | 0.30 | Eukaryotic translation elongation factor 1 gamma | EEF1G |
   yg27a08 | 4127 | R43968 | Hs.278589 | 9.43 | 1.24 | 2.76 | 0.40 | 0.29 | General transcription factor II, i, pseudogene 1 | GTF2IP1 |
Cellular traffic or structure proteins | ||||||||||
   yg19f05 | 200119 | R20424; R43544 | Hs.169793 | 1.51 | 0.36 | 7.37 | 1.32 | 4.86 | Ribosomal protein L32 | RPL32 |
   yc86h03 | 2760 | F12918; T75229 | Hs.182625 | 2.38 | 0.26 | 7.78 | 1.17 | 3.27 | Vamp (vesicle-associated membrane protein)-associated protein B and C | VAPB |
   yc87f04 | 5084 | R38549; T75126 | Hs.22826 | 1.83 | 0.11 | 5.59 | 0.64 | 3.06 | Tropomodulin 3 (ubiquitous) | TMOD3 |
   yf98g01 | 8512 | R18713 | Hs.75196 | 2.96 | 0.63 | 9.29 | 0.80 | 3.14 | Ankyrin repeat-containing protein | G9A |
   yh17e09 | 1304 | R59488; R59489 | Hs.30991 | 0.78 | 0.19 | 2.32 | 0.11 | 2.97 | Ankyrin repeat domain 6 | ANKRD6 |
   yf76d11 | 424 | R13426; R40938 | Hs.119324 | 0.84 | 0.08 | 2.07 | 0.35 | 2.48 | Kinesin-like 4 | KNSL4 |
   c-27f03 | 1382 | F07488 | Hs.89497 | 2.32 | 0.31 | 5.60 | 0.64 | 2.42 | Lamin B1 | LMNB1 |
   yc96a12 | 11155 | F13331; T77651 | Hs.159613 | 4.50 | 0.32 | 10.84 | 2.13 | 2.41 | Thyroid hormone receptor binding protein | AIB3 |
   yf57c11 | 1225 | R12822; r20734 | Hs.1501 | 0.94 | 0.22 | 2.25 | 0.22 | 2.39 | Syndecan 2 | SDC2 |
   yl71a06 | 10804 | H05894 | Hs.6682 | 1.33 | 0.11 | 2.94 | 0.20 | 2.21 | Solute carrier family 7, cationic amino acid transporter, y+ system, member 11 | SLC7A11 |
   yc99f07 | 11082 | T78361 | Hs.103042 | 2.21 | 0.07 | 0.98 | 0.19 | 0.44 | Microtubule-associated protein 1B | MAP1B |
   yf72e08 | 2558 | R13080; R40510 | Hs.7979 | 2.05 | 0.34 | 0.80 | 0.15 | 0.39 | Likely ortholog of mouse synaptic vesicle glycoprotein 2a | SV2 |
   yc87h12 | 2952 | F10545; F12946 | Hs.21611 | 5.68 | 0.59 | 1.93 | 0.17 | 0.34 | Kinesin family member 3C | KIF3C |
   yg54d05 | 604 | R25813; R46810 | Hs.117977 | 1.62 | 0.33 | 0.50 | 0.11 | 0.31 | Kinesin 2 (60-70 kD) | KNS2 |
   yf91b02 | 1980 | R16352; R42300 | Hs.103042 | 3.50 | 0.41 | 1.01 | 0.24 | 0.29 | Microtubule-associated protein 1B | MAP1B |
   yf72a03 | 115963 | R13048; R40479 | Hs.187958 | 1.46 | 0.34 | 0.40 | 0.06 | 0.28 | Solute carrier family 6, member 8, accessory proteins BAP31/BAP29 | SLC6A8, DXS1357E |
Immunity/inflammatory response | ||||||||||
   yg75d06 | 25621 | R54423 | Hs.179661 | 1.88 | 0.18 | 8.01 | 1.02 | 4.26 | FK506-binding protein 1A (12 kD) | FKBP1A |
   yg65b03 | 2453 | R35324 | Hs.9688 | 0.86 | 0.13 | 3.67 | 0.60 | 4.26 | Leukocyte membrane antigen | IRC1 |
   yg57f05 | 190007 | R34428 | Hs.181244 | 3.83 | 0.24 | 9.76 | 1.22 | 2.55 | MHC class I gene family |  |
   yf51e08 | 2563 | R12005; R39844 | Hs.75682 | 0.89 | 0.04 | 2.05 | 0.21 | 2.31 | Autoantigen | RCD-8 |
   c-2bh04 | 190137 | F03851; F07604 | Hs.284394 | 1.13 | 0.07 | 0.56 | 0.07 | 0.50 | Complement component 3 | C3 |
   yf59h02 | 5580 | R13549; R20669 | Hs.82689 | 1.05 | 0.21 | 0.47 | 0.10 | 0.44 | Tumor rejection antigen (gp96) 1 | TRA1 |
   yc86g03 | 8628 | F10456; F12856 | Hs.302749 | 1.51 | 0.35 | 0.58 | 0.09 | 0.39 | FK506-binding protein 9 (63 kD) | FKBP9 |
Protein processing | ||||||||||
   yf68a10 | 1071 | R40190; | Hs.75890 | 0.55 | 0.13 | 2.09 | 0.23 | 3.80 | Site-1 protease (subtilisin-like, sterol-regulated, cleaves sterol regulatory element binding proteins) | S1P |
   c-2na07 | 2001 | F04230; F07978 | Hs.102 | 1.01 | 0.16 | 0.46 | 0.10 | 0.45 | Aminomethyltransferase (glycine cleavage system protein T) | AMT |
   yc85d05 | 6301 | F10498; F12892 | Hs.170197 | 1.45 | 0.22 | 0.59 | 0.10 | 0.41 | Glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) | GOT2 |
   c-2ge12 | 2793 | Z40826; Z46090 | Hs.183212 | 1.14 | 0.19 | 0.45 | 0.09 | 0.39 | Isoprenylcysteine carboxyl methyltransferase | ICMT |
   yg52f04 | 202164 | R21082; R46258 | Hs.235887 | 1.55 | 0.31 | 0.54 | 0.08 | 0.34 | HMT1 (hnRNP methyltransferase, Saccharomyces cerevisiae)-like 1 | HRMT1L1 |
Proteases | ||||||||||
   yf64f07 | 2813 | R13707; R37801 | Hs.171501 | 1.27 | 0.24 | ND | ND | 0.39 | Ubiquitin specific protease 11 | USP11 |
Metabolism | ||||||||||
   yc97f08 | 1805 | R39698; T78043 | Hs.2838 | 2.73 | 0.24 | 9.35 | 0.86 | 3.42 | Malic enzyme 3, NADP(+)-dependent, mitochondrial | ME3 |
   yg97d06 | 3929 | R59198; R59256 | Hs.78989 | 0.68 | 0.07 | 1.99 | 0.18 | 2.94 | Alcohol dehydrogenase 5 (class III), chi polypeptide | ADH5 |
   c-2ca07 | 1549 | F03858; F07608 | Hs.180616 | 1.04 | 0.12 | 0.50 | ND | 0.48 | CD36 antigen (collagen type I receptor, thrombospondin receptor)-like 1 | CD36L1 |
   yc95g06 | 3164 | R39463; T77281 | Hs.155247 | 1.01 | 0.20 | 0.31 | 0.05 | 0.30 | Aldolase C, fructose-bisphosphate | ALDOC |
Miscellaneous | ||||||||||
   yg24g06 | 3097 | R19249; R44514 | Hs.22654 | 0.48 | 0.08 | 2.93 | 0.67 | 6.12 | Sodium channel, voltage-gated, type I, alpha polypeptide | SCNIA |
   yc89d05 | 10816 | F10796; F13191 | Hs.12365 | 1.26 | 0.20 | 5.46 | 0.36 | 4.34 | Synaptotagmin XIII | SYT13 |
   c-28e05 | 4334 | F07514 | Hs.6126 | 2.04 | 0.50 | 7.19 | 1.11 | 3.52 | Mannosidase, beta A, lysosomal-like | MANBAL |
   yg35g09 | 4463 | R20330 | Hs.88764 | 3.30 | 0.19 | 9.88 | 2.40 | 2.99 | Male-specific lethal-3 (Drosophila)-like 1 | MSL3L1 |
   yg36c01 | 292 | R24560; R44360 | Hs.6430 | 1.50 | 0.22 | 4.40 | 0.78 | 2.93 | Protein with polyglutamine repeat; calcium (Ca2+) homeostasis endoplasmic reticulum protein | ERPROT213-21 |
   yc98a06 | 1475 | R37847; T78111 | Hs.301789 | 1.55 | 0.27 | 4.52 | 0.35 | 2.92 | Capping protein (actin filament) muscle Z-line, alpha 1 | CAPZA |
   yf54h02 | 924 | R11969 | Hs.4865 | 1.41 | 0.17 | 3.05 | 0.18 | 2.17 | Voltage-gated sodium channel beta-3 subunit (scn3b gene) | HSA243396 |
   yf91a04 | 434 | R16348; R42296 | Hs.12152 | 1.00 | 0.24 | 2.03 | 0.16 | 2.04 | APMCF1 protein | APMCF1 |
   c-1ia09 | 4199 | Z39718; Z43661 | Hs.8834 | 0.64 | 0.15 | 1.30 | 0.19 | 2.02 | Ring finger protein 3 | RNF3 |
   yg83b04 | 4211 | R53332; R53937 | Hs.7022 | 1.19 | 0.28 | 0.59 | 0.09 | 0.50 | Dedicator of cytokinesis 3 | DOCK3 |
   yf57d02 | 4610 | R12627; R20528 | Hs.334688 | 1.51 | 0.25 | 0.75 | 0.13 | 0.50 | Phytanoyl-CoA hydroxylase interacting protein | PHYHIP |
   yg36h06 | 3087 | R24595; R44400 | Hs.7122 | 1.08 | 0.13 | ND | ND | 0.46 | Scrapie responsive protein 1 | SCRG1 |
   yf99b05 | 2822 | R18211; R42149 | Hs.79284 | 1.07 | 0.21 | 0.48 | 0.07 | 0.45 | Mesoderm specific transcript (mouse) homolog | MEST |
   c-24h06 | 92359 | Z40467; Z44591 | Hs.171545 | 1.02 | 0.20 | 0.45 | 0.11 | 0.44 | HIV-1 Rev binding protein | HRB |
   yd05d01 | 2346 | R38832; T80384 | Hs.13493 | 1.06 | 0.24 | 0.44 | 0.06 | 0.42 | Like mouse brain protein E46 | E46L |
   yf74e11 | 2106 | R13277; R40723 | Hs.334851 | 1.95 | 0.41 | 0.80 | 0.17 | 0.41 | LIM and SH3 protein 1 | LASP1 |
   yd01e11 | 3181 | T78746 | Hs.168640 | 1.17 | 0.27 | 0.47 | 0.10 | 0.40 | Homolog of mouse Ank | ANK |
   yf48e09 | 414 | R12292; R12804 | Hs.21050 | 1.22 | 0.26 | 0.47 | 0.07 | 0.38 | g20 protein | LOC51161 |
   yg16d07 | 1087 | R43459; R17969 | Hs.87125 | 9.91 | 2.06 | 3.35 | 0.51 | 0.34 | EH-domain containing 3 | EHD3 |
   yf57d07 | 12763 | R12632; R20533 | Hs.109706 | 1.78 | 0.23 | 0.58 | 0.09 | 0.33 | Hematological and neurological expressed I | HN1 |
   c-2Ia12 | 200991 | F04056; F07796 | Hs.74376 | 1.00 | 0.07 | 0.33 | 0.01 | 0.33 | Olfactomedin related ER localized protein | NOE1 |
   yf61b05 | 1882 | R13783; R37641 | Hs.297743 | 2.04 | 0.16 | 0.63 | 0.12 | 0.31 | Carbonic anhydrase X | CA10 |
   yf61a10 | 3960 | R39112; R13989 | Hs.2288 | 12.49 | 1.82 | 3.38 | 0.84 | 0.27 | Visinin-like 1 | VSNL1 |
   yg53b12 | 8924 | R25707; R62451 | Hs.169047 | 2.34 | 0.46 | 0.54 | 0.12 | 0.23 | Chondroitin sulfate proteoglycan 3 (neurocan) | CSPG3 |