Table 1 Putative protein-coding genes identified in Gemmata obscuriglobus

Metabolism and biosynthesis

   G63

BH001096

Putative isopropylmalate dehydratase

9.00E-09

Methanococcus jannaschii (Q58673)

B

   G80

BH001097

Heptaprenyl diphosphate synthase component

6.00E-18

Bacillus stearothermophilus (P55785)

B

   G83

BH001098

Peptide methionine sulfoxide reductase

4.00E-11

Deinococcus radiodurans (Q9RTB6)

B

   G84

BH001099

N4-(beta-N-acetylglucosaminyl)-L-asparaginase precursor

6.00E-27

Flavobacterium meningosepticum (Q47898)

B

   G87

BH001100

3-Oxoadipate enol-lactonase

2.00E-08

Acinetobacter calcoaceticus (P00632)

B

   G103

BH001101

Diaminopimelate epimerase

2.00E-43

Synechocystis PCC6803 (P74667)

B

   G108

BH001102

FDHD protein homolog

2.00E-45

Streptomyces coelicolor (Q9ZBWO)

B

   G110

BH001103

Acyl-CoA fatty-acid delta (9) desaturase

3.00E-05

Rattus norvegicus (P07308)

E

   G136

BH001104

1,4-Alpha-glucan branching enzyme

4.00E-11

Bacillus caldolyticus (P30537)

B

   G179

BH001105

Putative asparagine synthetase (glutamine-hydrolyzing)

2.00E-07

Mycobacterium tuberculosis (O10374)

B

   G184

BH001106

2-Amino-3-ketobutyrate coenzyme A ligase

5.00E-25

Bacillus subtilis (O31777)

B

   G222

BH001107

Threonine dehydratase biosynthetic (threonine deaminase)

9.00E-53

Burkholderia cepacia (P53607)

B

   G240

BH001108

Ribonucleotide reductase large chain

1.00E-05

Schizosaccharomyces pombe (P36602)

E

Transport

   G74

BH001109

Large conductance mechanosensitive channel

8.00E-10

Haemophilus influenzae (P44789)

B

   G139

BH001110

Cadmium efflux system accessory protein

4.00E-05

Listeria monocytogenes (Q56405)

B

   G185

BH001111

Sulfate transport ATP-binding protein CysA

6.00E-35

Synechocystis PCC6803 (P74548)

B

Regulation and signal transduction

   G99

BH001112

OmpR homolog

6.00E-11

Guillardia theta chloroplast (AF041468)

E(c)

   G114

BH001113

Nitrogen regulation protein NtrB

2.00E-16

Bradyrhizobium sp.(P10578)

B

   G217

BH001114

Transcriptional regulatory protein AfsQ1

3.00E-09

Streptomyces coelicolor (Q04942)

B

   G223

BH001115

Transcriptional repressor SmtB

2.00E-05

Synechococcus PCC7942 (P30340)

B

DNA replication/insertion

   VG33

BH001116

Replicative DNA helicase

2.00E-11

Synechocystis PCC6803 (Q55418)

B

   G86

BH001117

H repeat-associated protein in RHSC-PHRB intergenic region

1.00E-17

Escherichia coli (P75741)

B

   G142

BH001118

TraI protein (DNA helicase I)

2.00E-12

Escherichia coli (P14565)

B

   G165

BH001119

Insertion element IS402 hypothetical 24 kd

6.00E-05

Burkholderia cepacia (P24536)

B

   G182

BH001120

Putative helicase HelY

5.00E-05

Mycobacterium tuberculosis (Q10701)

B

   G196

BH001121

TraI protein (DNA helicase I)

3.00E-12

Escherichia coli (P14565)

B

   G235

BH001122

Probable transposase for insertion sequence element IS702

3.00E-18

Fremyella diplosiphon (Q00462)

B

Translation

   G51

BH001123

50S ribosomal protein L23

1.00E-13

Aquifex aeolicus (O66433)

B

   G154

BH001124

50S ribosomal protein L4

3.00E-10

Bacillus stearothermophilus (P28601)

B

   G156

BH001125

Arginyl-tRNA synthetase

4.00E-21

Escherichia coli (P11875)

B

   G230

BH001126

Probable tRNA methyl transferase

5.00E-05

Synechocystis PCC6803 (P73755)

B

Miscellaneous

   VG17

BH001127

Serine-threonine protein kinase

1.00E-22

Myxococcus xanthus (P54737)

B

   G92

BH001128

Cell division protein FtsH

4.00E-04

Lactococcus lactis subsp. lactis (P46469)

B

   G149

BH001129

Integrin alpha-V (vitronectin receptor alpha subunit precursor)

9.00E-05

Homo sapiens (P06756)

E

   G159

BH001130

Serine protease DO-like precursor

7.00E-10

Chlamydia trachomatis (P18584)

B

   G189

BH001131

H repeat-associated protein in RHSE-NARV intergenic region

2.00E-13

Escherichia coli (P28917)

B

   G191

BH001132

Ribonuclease inhibitor

6.00E-05

Sus scrofa (P10775)

E

Hypothetical proteins

   VG21

BH001133

Hypothetical 47.5 kDa protein Cy9c4.09

1.00E-04

Mycobacterium tuberculosis (Q50739)

B

   G76

BH001134

Hypothetical protein in DHLA 3' region

3.00E-17

Xanthobacter autotrophicus (P22644)

B

   G96

BH001135

Hypothetical 42.1 kDa protein

5.00E-04

Bacillus subtilis (O31712)

B

   G137

BH001136

Hypothetical protein in DHLA 3' region

4.00E-31

Xanthobacter autotrophicus (P22644)

B

   G180

BH001137

Hypothetical 30.2 kDa protein SLR1717

1.00E-29

Synechocystis strain PCC6803 (P73846)

B

   G231

BH001138

Hypothetical protein MJ0682

2.00E-35

Methanococcus jannaschii (Q58095)

A