Skip to main content

Table 5 The complete list of bHLH genes from Mus musculus

From: Phylogenetic analysis of the human basic helix-loop-helix proteins

Gene name

Family

Human ortholog(s)

Accession number

Mash1

Achaete-Scute a

P50553

gb|AAB28830.1

Mash2

Achaete-Scute a

Q99929

gb|AAD33794.1

Mash3

Achaete-Scute b

N024228

sp|CAC37689

Myogenin

MyoD

P15173

sp|P12979

Myf6

MyoD

P23409

ref|NP_032683.1

MyoD

MyoD

P15172

sp|P10085

Myf5

MyoD

P13349

ref|NP_032682.1

E2A

E12/E47

N011269

sp|15806

TF12

E12/E47

Q99081

ref|NP_035674.1

TCF4

E12/E47

P15884/P15884 D

ref|NP_038713.1

KA1

E12/E47

?

dbj|BAA06218.1

Math1

Atonal

Q92858

dbj|BAA07791.1

Math5

Atonal

N024033

gb|AAC68868.1

Mist1

Mist

N007757

gb|AAF17706.1

Oligo1

Oligo

N011512

ref|NP_058664.1

Oligo2

Oligo

Q9NZ14

sptrembl|Q9EQW6

Oligo3

Oligo

N025741

sptrembl|Q9EQW5

Beta3

Beta3

N023718

gb|AAF32324.1

Q9H494

Beta3

N011476

sptrembl|Q9H494

Math4a

Neurogenin

Q9H2A3

gb|AAC53028.1

Math4b

Neurogenin

N024089

emb|CAA70366.1

Math4C

Neurogenin

Q92886

sp|P70660

Math2

NeuroD

N007825

dbj|BAA07923.1

Math3

NeuroD

N009563

gb|AAC15969.1

NDF1

NeuroD

Q13562

sp|Q62414

NDF2

NeuroD

Q15784

gb|AAC52203.1

Math6

Net

N005263

spnew|BAB39468

Mesp1

Mesp

?

gb|AAF70375.1

Mesp2

Mesp

?

gb|AAB51199.1

pMeso1

Mesp

N015926

ref|NP_062417.1

Pod1

MyoR

N007203

gb|AAC62513.1

MyoR

MyoR

N008253

gb|AAD10053.1

PTF1

PTFa

Q9HC25

emb|CAB65273.1

eHand

Hand

O96004

gb|AAB35104.1

dHand

Hand

O95300

gb|AAC52338.1

Twist

Twist

Q15672

gb|AAA40514.1

Dermo1

Twist

?

emb|CAA69333.1

Paraxis

Paraxis

N011493

gb|AAA86825.1

Scleraxis

Paraxis

?

gb|AAB34266.1

Hen1

NSCL

Q02575

gb|AAA39840.1

Hen2

NSCL

Q02577

gb|AAB22580.1

Tal1

SCL

P17542

emb|CAB72256.1

Tal2

SCL

Q16559/N024631

gb|AAA40162.1

Lyl1

SCL

P12980

emb|CAA40870.1

Lyl2

SCL

P12980

pir||B43814

Figa

Figa

N005420

sptrembl|O55208

AP4

AP4

Q01664

gb|AAF80448.1

Mnt

Mnt

Q99583

swissprot|O08789

Mxi1

Mad

P50539

swissprot|P50540

Mad1

Mad

Q05195

swissprot|P50538

Mad3

Mad

AAH00745

sptrembl|Q60947

Mad4

Mad

Q14582

pir||S60006

Max

Max

P25912

sp|P28574

N-Myc

Myc

P04198

gb|AAA39833.1

C-Myc

Myc

P01106

emb|CAA25508.1

L-Myc

Myc

P12524

emb|CAA32128.1

S-Myc

Myc

?

ref|NP_034980.1

SRC1

SRC

O43792

gb|AAB01228.1

SRC2

SRC

Q15596

gb|AAB06177.1

SRC3

SRC

Q9Y6Q9

sp|O09000

MITF

MITF

O75030

gb|AAF81266.1

TFE3

MITF

P19532

gb|AAB21130.1

TFEB

MITF

P19484

gb|AAD20979.1

TFEC

MITF

N009714/O14948

gb|AAD24426.1

SREBP1

SREBP

P36956

dbj|BAA74795.1

SREBP2

SREBP

Q12772

gb|AAG01859.1

USF1

USF

P22415

emb|CAA64627.1

USF2

USF

Q15853/N026304

pir||A56522

Mlx

MLX

Q9NP71

gb|AAK20940.1

TF4

TF4

Q9UH92

gb|AAB51368.1

Bmal1

BMAL

O00327

dbj|BAA76414.1

ARNT1

ARNT

P27540

gb|AAA56717.1

ARNT2

ARNT

Q9HBZ2

dbj|BAA09799.1

Clock

Clock

O15516

swissnew|O08785

NPAS2

Clock

Q99743/N023384

gb|AAB47249.1

Hif1a

HIF

Q16665

emb|CAA70306.1

EPAS1

HIF

Q99814

gb|AAC12871.1

Hif3a

HIF

O95262

gb|AAC72734.1

NPAS1

HIF/Sim/Trh

Q99742

gb|AAB47247.1

Sim1

Sim

P81133

gb|AAC05481.1

Sim2

Sim

Q14190

gb|AAB84099.1

NPAS3

Trh

Q9H323

gb|AAF14283.1

AHR

AHR

Q13804

dbj|BAA07469.1

Id1

Emc

P41134

sp|P20067

Id2

Emc

Q02363

gb|AAA79771.1

Id3

Emc

Q02535

sp|P41133

Id4

Emc

P47928

emb|CAA05120.1

Hey1

Hey

Q9Y5J3

emb|CAB51321.1

Herp1

Hey

Q9UBP5

gb|AAF37298.1

Hes1

Hairy

Q14469

dbj|BAA03931.1

Dec1

E(spl)

O14503

sptrembl|O14503

Dec2

E(spl)

BAB21502

spnew|BAB21503

Hes2

E(spl)

Q9Y543

dbj|BAA24091.1

Hes3

E(spl)

N019265

dbj|BAA19799.1

Hes5

E(spl)

N004350

dbj|BAA06858.1

Hes6

E(spl)

Q9P2S3

gb|AAF63757.1

Hes7

E(spl)

Q9BYEQ

spnew|BAB39526

BAA9469

E(spl)

N019265

spnew|BAA9469

Coe1

Coe

Q9UH73

swissprot|Q07802

MOTF1

Coe

?

gb|AAB58423.1

Coe2

Coe

?

swissprot|O08792

Coe3

Coe

?

swissprot|O08791

  1. Mouse genes are listed with the family in which they are included, the identification of their human ortholog(s) (? indicates that no clear ortholog was found, see text for details), and their accession number. In most cases, several names exist for each gene. We report here only one name; synonyms can be found in the protein databases using the reported accession numbers.