Table 5a List of known attenuators in E. coli compared with predictions in four other genomes of proteobacteria (gamma subdivision)

E. coli

H. influenzae

V. cholerae

P. aeruginosa

X. fastidiosa

ID

Z-score

ID^a

No. of predictions^b

ID^a

No. of predictions^b

ID^a

No. of predictions^b

ID^a

No. of predictions^b

Gene^c

b2019

-7.560

HI0468

1

VC1132

1

PA4449

0

XF2220

0

ATP phosphoribosyltransferase (hisG)

b3767

-4.529

-

-

-

-

-

-

-

-

acetolactate synthase II, large subunit (ilvG)

b2599

-3.945

HI1145

0

VC0705

0

PA3166

0

XF2325

0

chorismate mutase-P and prephenate dehydratase (pheA)

b3671

-3.923

-

-

VC0031

0

-

-

XF1821

0

acetolactate synthase I, large subunit (ilvB)

b3722

-3.823

-

-

-

-

-

-

-

-

PTS beta-glucosides, enzyme II (bglF)

b0002

-3.788

HI0089

1

VC2364

1

PA0904

0

XF2225

0

aspartokinase I homoserine dehydrogenase I (thrA)

b3752

-3.573

HI0505

0

VCA0131^d

-

PA1950

0

XF0366

0

ribokinase (rbsK)

b0074

-3.559

HI0986

2

VC2490

1

PA1217

0

XF1818

0

2-isopropylmalate synthase (leuA)

b0170

-3.506

HI0914

1

VC2259

1

PA3655

0

XF2579

0

protein chain elongation factor EF-Ts (tsf)

b3813

-3.503

HI1188

0

VC0190

0

PA5443

0

XF0050

0

DNA-dependent ATPase I and helicase II (uvrD)

b4245

-3.387

-

-

VC2510

0

PA0402

0

XF2226

0

aspartate carbamoyltransferase, catalytic subunit (pyrB)

b1264

-2.717

HI1387

0

VC1174

1

PA1001

0

-

-

anthranilate synthase component I (trpE)

b3642

-2.675

HI0272

0

VC0211

1

PA5331

0

XF0153

0

orotate phosphoribosyltransferase (pyrE)

b3723

-2.565

-

-

-

-

-

-

-

-

positive regulation of bgl operon (bglG)