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Table 1 Top-ranked 50 genes (25 pairs) for ALL/AML class separation using AP (all pairs) ranking

From: New feature subset selection procedures for classification of expression profiles

Pair rank Gene ID Pair t-score Gene t-score Gene rank Gene annotation
1 M84526_at 16.16 12.88 1 DF D component of complement (adipsin)
1 M92287_at 16.16 8.87 6 CCND3 Cyclin D3
2 M23197_at 15.43 11.72 2 CD33 CD33 antigen (differentiation antigen)
2 M31523_at 15.43 11.0 3 TCF3 Transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
3 U46499_at 13.56 9.14 5 Glutathione S-transferase, microsomal
3 M31303_rna1_at 13.56 6.52 36 Oncoprotein 18 (Op18) gene
4 M63138_at 13.53 9.46 4 CTSD Cathepsin D (lysosomal aspartyl protease)
4 HG1612-HT1612_at 13.53 8.47 10 Macmarcks
5 X62320_at 12.58 8.38 11 GRN Granulin
5 Z14982_rna1_at 12.58 5.54 93 MHC-encoded proteasome subunit gene LAMP7-E1 (LMP7)
6 M31211_s_at 12.41 8.61 9 MYL1 Myosin light chain (alkali)
6 X62654_rna1_at 12.41 7.32 17 ME491 gene extracted from H. sapiens gene for Me491/CD63 antigen
7 M27891_at 12.15 8.83 7 CST3 Cystatin C (amyloid angiopathy and cerebral hemorrhage)
7 U89922_s_at 12.15 5.24 115 LTB Lymphotoxin-beta
8 X59417_at 12.14 7.99 12 Proteasome iota chain
8 X52056_at 12.14 6.52 37 SPI1 Spleen focus forming virus (SFFV) proviral integration oncogene spi1
9 M19507_at 12.09 7.03 24 MPO Myeloperoxidase
9 M89957_at 12.09 6.92 28 IGB Immunoglobulin-associated beta (B29)
10 M84371_rna1_s_at 11.9 7.18 23 CD19 gene
10 U16954_at 11.9 6.43 40 (AF1q) mRNA
11 M63379_at 11.74 7.56 13 CLU Clusterin (complement lysis inhibitor; testosterone-repressed prostate message 2; apolipoprotein J)
11 M83667_rna1_s_at 11.74 7.52 14 NF-IL6-beta protein mRNA
12 M16038_at 11.72 7.31 18 LYN V-yes-1 Yamaguchi sarcoma viral related oncogene homolog
12 Y08612_at 11.72 6.31 47 Rabaptin-5 protein
13 D88422_at 11.68 8.72 8 Cystatin A
13 M11722_at 11.68 7.18 21 Terminal transferase mRNA
14 X66401_cds1_at 11.67 5.89 69 LMP2 gene extracted from H. sapiens genes TAP1, TAP2, LMP2, LMP7 and DOB
14 Y00433_at 11.67 4.72 182 GPX1 Glutathione peroxidase 1
15 M63959_at 11.61 6.59 34 LRPAP1 Low density lipoprotein-related protein-associated protein 1 (alpha-2-macroglobulin receptor-associated protein 1)
15 X51521_at 11.61 6.44 38 VIL2 Villin 2 (ezrin)
16 Z15115_at 11.37 7.49 15 TOP2B Topoisomerase (DNA) II beta (180 kDa)
16 U10868_at 11.37 5.55 92 ALDH7 Aldehyde dehydrogenase 7
17 Y12670_at 11.25 5.67 82 LEPR Leptin receptor
17 U77948_at 11.25 5.6 87 KAI1 Kangai 1 (suppression of tumorigenicity 6, prostate; CD82 antigen (R2 leukocyte antigen detected by monoclonal antibody IA4))
18 U46751_at 11.2 5.8 73 Phosphotyrosine independent ligand p62 for the Lck SH2 domain mRNA
18 L06797_s_at 11.2 5.77 74 Probable G protein-coupled receptor LCR1 homolog
19 M95678_at 11.19 5.73 77 PLCB2 Phospholipase C, beta 2
19 U72936_s_at 11.19 5.38 101 X-linked helicase II
20 S76617_at 11.16 6.43 41 BLK Protein-tyrosine kinase blk
20 L09209_s_at 11.16 5.9 68 APLP2 Amyloid beta (A4) precursor-like protein 2
21 M55150_at 11.11 6.7 32 FAH Fumarylacetoacetate
21 M96803_at 11.11 4.74 180 SPTBN1 Spectrin, beta, non-erythrocytic 1
22 X17042_at 11.08 6.93 27 PRG1 Proteoglycan 1, secretory granule
22 X99920_at 11.08 5.15 124 S100 calcium-binding protein A13
23 S50223_at 10.86 6.65 33 HKR-T1
23 U82759_at 10.86 4.39 229 GB DEF Homeodomain protein HoxA9 mRNA
24 J03589_at 10.83 5.62 85 Ubiquitin-like protein GDX
24 X12447_at 10.83 5.16 122 ALDOA Aldolase A
25 X74262_at 10.8 5.89 70 Retinoblastoma binding protein p48
25 L19437_at 10.8 5.13 127 TALDO Transaldolase