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Table 3 Enhancer binding proteins (EBPs) of different members of the Rhizobiales

From: Prediction and overview of the RpoN-regulon in closely related species of the Rhizobiales

 

Re

NGR

Bj

R7A

Ml

Sm

At

Bm

NtrC

    

Mlr0389 (14021374)

SMc01043 (15074392)

Atu1446 (17739866)

BmeI0866 (17987149)

NtrX

    

Mlr0400 (14021376)

SMc01045 (15074394)

Atu1448 (17739869)

BmeI0868 (17987151)

DctD-1

   

Msi357 (20804186)

Mlr5842 (14025622)

SMb20613 (15141413)

Atu3296 (17741681)

 

DctD-2

    

Mlr7239 (14026791)

SMb21200 (15140751)

Atu0114 (17738434)

 

NifA

RE1SP0000735 (21492735)

Y4uN (16519979)

ID736 (12620732)

Msi346 (20804175)

Mll5857 (14025634)

SMa0815 (14523538)

  
    

Msi361 (20804190)

Mll5837 (14025617)

   

EBP-1

    

Mll3001 (14023386)

SMc04011 (15075819)

Atu3764 (17742191)

BmeII0011 (17988355)

EBP-2

     

SMb20102 (15139974)

Atu4741 (17743247)

 

EBP-3

 

Y4pA (16519894)

ID407 (12620599)

 

Mll9384 (14028438)

   
  1. EBPs were predicted using HMMER 2.2 g (see Materials and methods). The species acronyms are as in Table 2. Orthologs (having at least 30% amino-acid identity over the full length of the polypeptide) are situated on the same row (GenBank GI number). EBP-n: uncharacterized EBPs.