Table 3 Present genes of H. pylori strains
From: Improved analytical methods for microarray-based genome-composition analysis
Strain | Number of present genes found in the original publication [11] | Number of present genes found by our constant-cutoff reanalysis | Number of present genes found by GACK trinary analysis | Difference between GACK and [11] |
|---|---|---|---|---|
SS1 | 1,463 | 1,467 | 1,256 | -207 |
G50 | 1,499 | 1,501 | 1,371 | -128 |
SPM-314 | 1,526 | 1,529 | 1,289 | -237 |
H34 | 1,449 | 1,450 | 1,249 | -200 |
J99 | 1,511 | 1,511 | 1,309 | -202 |
AR32 | 1,510 | 1,513 | 1,251 | -259 |
SPM-292 | 1,453 | 1,455 | 1,242 | -211 |
26695 | 1,556 | 1,557 | 1,398 | -158 |
87A300 | 1,487 | 1,490 | 1,185 | -302 |
G27 | 1,476 | 1,478 | 1,288 | -188 |
NCTC11638 | 1,502 | 1,503 | 1,445 | -57 |
SPM-342 | 1,477 | 1,475 | 1,302 | -175 |
SPM-326 | 1,514 | 1,513 | 1,241 | -273 |
G39 | 1,488 | 1,499 | 1,345 | -143 |
HP1 | 1,506 | 1,508 | 1,284 | -222 |
Mean | 1,494 | 1,497 | 1,297 | -197 |