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Table 2 Synteny conservation between B. malayi BAC-end genome survey sequences and C. elegans genome sequence

From: Conservation of long-range synteny and microsynteny between the genomes of two distantly related nematodes

Maximal probability of either of blast matches

Number of BACs with both ends matching C. elegans proteins

Number of BACs with both ends matching C. elegans proteins on the same chromosome

Distance between C. elegans proteins (megabases)

Percentage of matches on same chromosome

<e-8

164

90

4.4

54.88

<e-10

138

78

4.6

56.52

<e-15

51

29

4.7

56.86

<e-20

17

10

5.3

58.82

  1. B. malayi BAC end sequences were compared to the C. elegans proteome using BLASTX. Matches with a probability <e-8 were noted, and chromosomal positions determined from WormBase. Of 2,200 BACs with matches, 164 had matches to both ends.
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Genome Biology

ISSN: 1474-760X

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