Table 4 Summary of various domains present in Arabidopsis EF-hand-containing proteins and their InterPro accession numbers
From: Analysis of EF-hand-containing proteins in Arabidopsis
Domain* | Accession number | Protein type |
ATP_GTP_A | IPR001687 | Binding site motif |
Calflagin | IPR003299 | Calcium-binding |
Recoverin | IPR002048 | Calcium-binding |
S-100/ICaBP type CBP | IPR001751 | Calcium-binding |
Adptrnslcase | IPR000213 | Carrier |
Cation (ca, na) pore region | IPR001682 | Carrier |
Graves disease | IPR002167 | Carrier |
Mitoch_carrier | IPR002067 | Carrier |
Potassium channel | IPR001622 | Carrier |
PTM | IPR003880 | Carrier |
bHLH | IPR001092 | Dimerization |
BTB/POZ domain | IPR000210 | Dimerization |
Biotin operon repressor | IPR004209 | DNA interaction |
DDT domain | IPR004022 | DNA binding |
HLH_Myc | IPR003015 | DNA binding |
Myb DNA binding domain | IPR001005 | DNA binding |
Elongation factor aEF-2 | IPR004543 | Elongation factor |
EFG_C | IPR000640 | Elongation factor |
GTP_EFTU(_D2) | IPR004161 | Elongation factor |
pfkB | IPR002173 | Enzyme |
Aminoacyl-transfer RNA syn class II | IPR002106 | Enzyme |
AMP-dependent synthetase and ligase | IPR000873 | Enzyme |
ATP synthase alpha and beta subunit | IPR000194 | Enzyme |
Cytb-245 hc | IPR000778 | Enzyme |
Cytochrome P450 enzyme | IPR001128 | Enzyme |
Euk protein kinase | IPR000719 | Enzyme |
FAD_pyr_redox | IPR001237 | Enzyme |
Ferric_reduct | IPR002916 | Enzyme |
GatC | IPR004415 | Enzyme |
GLFV_dehydrog | IPR001625 | Enzyme |
PIP5K | IPR002498 | Enzyme |
PIPLC | IPR001992 | Enzyme |
Plant peroxidase | IPR000823 | Enzyme |
Protein phosphatase 2C subfamily | IPR000222 | Enzyme |
PS_Darbxylase, Porpobil_deam | IPR003817 | Enzyme |
Pyr_redox | IPR001237 | Enzyme |
Small GTPase | IPR001806 | Enzyme |
ThiF_family | IPR000594 | Enzyme |
UBACT | IPR000127 | Enzyme |
Jacalin-related lectin domain | IPR001229 | Lectin |
Dynamin family | IPR001401 | Microtubule associated |
NAD-binding site | IPR000205 | NAD binding |
No apical meristem protein | IPR003441 | Plant development |
Domain* | Accession | Protein type |
Serpin | IPR000215 | Protease inhibitor |
14-3-3 | IPR000308 | Protein interaction |
Calponin homology | IPR001715 | Protein interaction |
EPS15 repeat | IPR000261 | Protein interaction |
F-box domain | IPR001810 | Protein interaction |
SET-domain of transcriptional regulators | IPR001214 | Protein interaction |
Ubiquitin-associated domain | IPR003903 | Protein interaction |
Zn-finger-ZZ type | IPR000433 | Protein interaction |
Zn-finger-FYVE | IPR000306 | Protein interaction |
Zn-finger-Ra-binding | IPR001876 | Protein interaction |
PPR repeats | IPR000285 | Repeat |
TPR | IPR001440 | Repeat |
Josephin, UIM | IPR002950 | Repeat |
Kelch repeat | IPR001798 | Repeat |
ATHILA | IPR004312 | Retrotransposon |
NPH3 | IPR004249 | Signal transduction |
ER_TARGET | IPR000886 | Targeting |
NLS_BP | IPR001472 | Targeting |
PHD-finger | IPR001965 | Transcription |
eIF4-gamma/eIF | IPR003307 | Translation |
PTS_HPR_SER | IPR002114 | Transport |
Nucleoside_tran | IPR002259 | Transport |
En/Spm-like transposon proteins | IPR004242 | Transposon |