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Table 2 Summary of the CPKs and CRKs in the Arabidopsis genome

From: Analysis of EF-hand-containing proteins in Arabidopsis

Gene ID

Size (amino acids)

Number of EF hands

Targeting signal

Other names

References

CDPKs

     

   At1g18890

545

4

ch (.877)

CPK10, AtCDPK1

[71,74]

   At1g35670

495

4

 

CPK11 *, AtCDPK2

 

   At1g50700

521

4

 

CPK33

 

   At1g61950

547

4

 

CPK19 *

 

   At1g74740

567

4

 

CPK30, AtCDPK1a

 

   At1g76040

534

4

 

CPK29 *

 

   At2g17290

540

4

 

CPK6, CDPK3

[66,71]

   At2g17890

571

4

ch (.93)

CPK16

 

   At2g31500

582

4

ch (.93)

CPK24

 

   At2g35890

520

1

 

CPK25

 

   At2g38910

583

4

 

CPK20

 

   At2g41860

530

4

 

CPK14

 

   At3g10660

646

4

 

CPK2, CDPK2

 

   At3g20410

541

4

 

CPK9

[66,82]

   At3g51850

503

4

 

CPK13

 

   At3g57530

560

4

 

CPK32

 

   At4g04700

494

4

 

CPK27 *

 

   At4g04710

575

5

 

CPK22 *

 

   At4g04720

531

4

 

CPK21

 

   At4g04740

520

4

 

CPK23 *

 

   At4g09570

501

4

 

CPK4

[66]

   At4g21940

554

4

ch (.731)

CPK15

 

   At4g23650

529

4

ch (.949)

CPK3, CDPK6

 

   At4g35310

556

4

 

CPK5

 

   At4g36070

536

4

 

CPK18 *

 

   At4g38230

484

4

 

CPK26

 

   T19J18 7-m

453

4

 

CPK31 *, g5732059

 

   At5g04870

610

4

 

CPK1, AK1

[83]

   At5g12180

528

4

 

CPK17

 

   At5g12480

535

4

 

CPK7

[6]

   At5g19360

523

4

 

CPK34

 

   At5g19450

533

4

 

CPK8, CDPK19

[66,69]

   At5g23580

490

4

mt (.662)

CPK12, CDPK9

[66,69]

   At5g66210

523

4

ch (.78)

CPK28

 

CRKs

     

   At1g49580

606

1

 

CRK8

 

   At2g46700

595

1

 

CRK3

 

   At3g50530

601

1

 

CRK5

 
  1. The EF-hands were analyzed using InterProScan. Target signals are according to Target P (ch, chloroplast; mt, mitochondria). Only signals with scores of 0.600 or above were included. All CPKs and CRKs have variable numbers of transmembrane domains (2-7) and N-myristoylation site(s). The asterisks (*) indicate size incorrectly annotated in MAtDB; the corrected sizes are available at [65].