From: Molecular archeology of L1 insertions in the human genome
L1 genome location compared to genes* | mRNA | CDS |
Fully contained in genes | 17% | 13% |
Same orientation | 38% | 38% |
Average L1 length within gene annotation (nucleotides) | 1,470 | 1,490 |
Opposite orientation | 62% | 62% |
Average L1 length within gene annotation (nucleotides) | 1,815 | 1,780 |
Average distance from an L1 to a gene (kb) | 282 | 283 |
Minimum distance 9 nucleotides | Â | Â |
Maximum distance 3,840 kb | Â | Â |
Same orientation as nearest gene | 49% | 49% |
Opposite orientation as nearest gene | 51% | 51% |
Annotated genes with L1s within boundaries | ||
Total number of genes with L1s | 2,864 | 2,352 |
Average genome extent (kb) | 161 | 141 |
Minimum genome extent (kb) | 1.9 | 2.5 |
Maximum genome extent (kb) | 1,971 | 1,281 |
Average AT composition | 55% | 55% |
Minimum AT composition | 31% | 31% |
Maximum AT composition | 69% | 69% |