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Figure 6 | Genome Biology

Figure 6

From: Two C or not two C: recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins

Figure 6

Phylogenetic tree, conserved gene context and multiple alignment of L32 ribosomal proteins. Designations are as in Figure 1. Gene name abbreviations: fabH, 3-oxoacyl-(acyl-carrier protein) synthase; plsX, fatty acid/phospholipid synthesis protein; aspP, acyl carrier protein; uMB, predicted metal-binding, possibly nucleic acid-binding protein (COG1399); L32, L33, ribosomal proteins. A partial multiple alignment of L32 protein sequences is shown on the right (the complete multiple alignment used for the tree reconstruction had 58 positions). Mitochondrial L32 protein from Schizosaccharomyces pombe (GI:7493310) was additionally included in the tree. The L32 protein from Staphylococcus aureus (GI: 13700928) was included in the tree instead of the sequence from S. pyogenes (SPy2159), which appears to be truncated.

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Genome Biology

ISSN: 1474-760X

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