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Table 2 Sensitivity of the clustering method to different merging parameters

From: A clustering method for repeat analysis in DNA sequences

  

Minimal exact repeat 25 bp

Minimal exact repeat 50 bp

G (bp)

op (%)

Number of merging repeats

Number of classes

Number of merging repeats

Number of classes

50

 

1031

122

655

63

25

 

1155

162

741

77

5

 

1394

218

843

92

 

50

2328

357

1305

165

 

95

3748

510

1892

234

 

100

4564

550

2322

242

  1. The length of the Neisseria meningitidis genome is 2,272,351 bp [20].