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Table 1 Homology with mitochondrial DNA

From: Isolation, in silico characterization and chromosomal localization of a group of cDNAs from ciliated epithelial cells after in vitro ciliogenesis

Clone names Homology to normal Homologous Homology to Chromo- Homologous In between Distance
  database (identity), region, extent human clone some region, extent markers from P-tel
  accession number of similarity (HTGS)   of similarity   (kb)
   (bp)*, identity accession   (bp)*, identity   
   (bp/bp) number   (bp/bp)   
34-18, 356 bp L00016.1 Hs urf4 24-336, 313/313 AC021965 5 35-333, 271/299 D5S2400 & 124831
  gene, mitochondrial      SHGC-141614  
    AC008670 5 24-145, 111/123 D5S2056 & AA007G12 82616
    AC012363 2 80-246, 136/137 stSG60109 & 30855
       RH120618  
36-62, 100 bp NC_001807.2 Hs 13-87, 74/76 AL160031 13 18-87, 70/71 D13S1223 & DD13s943 96955
  mitochondrion       
    AC008670 5 30-77, 45/49 D5S2408 & EE8-Sp6 96746
5R22, 244 bp NC_001807.2 Hs 19-224, 206/206 AC021965 5 19-217, 169/199 D5S2400 & 124831
  mitochondrion      SHGC-141614  
    AC016571 5 13-269, 253/260 RH122707 & stSG3646 206852
36-105, 70 bp NC_001807.2Hs 15-51, 31/36 NSH NA NA NA NA
  mitochondrion       
24-16, 215 bp NC_001807 Hs 1-196, 195/196 AC021965 5 1-196, 178/196 D5S2400 & 124831
  mitochondrion      SHGC-141614  
    AC018806 5 1-167, 151/167 D5S409 & H119908 90813
5R16, 56 bp NC_001807 Hs 20-37, 18/18 AC055801 2 19-35, 16/16 RH112539 & 110180
  mitochondrion      D2S2002  
    AC010290 5 37-53,17/17 G-7042470 & 171125
       GDB:187625  
    AP000686 1 11 37-53,17/17 RH79933 & DD11S3991 176404
9625, 135 bp NC_001807.2 Hs 16-64, 48/49 AC068619 17 35-114, 66/80 NMF 124848
  mitochondrion       
9639, 179 bp NC_001807.2 Hs 13-169, 137/149 AC025380 X 55-140, 72/86 stSG9218 & 78184
  mitochondrion      HSSTS293  
6085, 111 bp NC_001807 Hs 31-100, 69/70 AL359496 1 31-100, 68/70 NMF NA
  mitochondrion       
36-16, 105 bp NC_001807 Hs 24-82, 57/59 AC008670 5 27-82, 51/56 D5S2056 & 82616
  mitochondrion      A007G12  
36-100, 342 bp NC_001807 Hs 36-175,140/140 AC024033 12 36-175, 140/140 stSG62230 & 73482
  mitochondrion 172-320, 146/150    172-320, 146/150 RH47270  
    AC010270 5 36-175,140/140 D5S2408 & EE8-Sp6 96746
      172-320, 146/150   
36-34, 72 bp NC_001807 Hs 18-55, 37/38 AC021914 11 21-52, 30/32 sTSG4656 & 26100
  mitochondrion      sts-N93614  
36-36, 87 bp AF134583 Hs 19-67, 49/49 AL049739 6 26-46, 21/21 S78653 & 39448
  mitochondrial      stSG46623  
  DNA-like       
9694, 150 bp L00016.1 Hs urf4 19-132, 114/114 AC021965 5 19-121, 95/103 D5S2400 & 124831
  gene, mitochondrial      SHGC-141614  
34-47, 103 bp NC_001807.2 Hs 16-82, 67/67 AC022223 5 16-82, 67/67 RH12239 & 95113
  mitochondrion      WI-18379  
  1. *Extent of similarity, the number corresponds to the starting and ending base pair in the respective homologous gene with the EST. †Identity, the number corresponds to the identical base pair of EST/homologous gene. NA, not applicable; Hs, Homo sapiens; Dm, Drosophila melanogaster; Dr, Drosophila radiodurans. NSH, no significant homology (identity less than 20 bases); NMF, no matches found.