Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence

Reddy, Anireddy SN; Day, Irene S

doi:10.1186/gb-2001-2-7-research0024

Table 3 Analysis of exon sizes in class XI myosins and the domain coded by each exon

From: Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence

	At XIG		At XIH		At MYA2		At XIB		At XID		At XIA		At XIF
No.	Size	Domain	Size	Domain	Size	Domain	Size	Domain	Size	Domain	Size	Domain	Size	Domain
1	36	N	3	N	3	N	3	N	3	N	3	N	3	N
2	126	N	139	N	129	N	129	N	171	N	126	N	129	N
3	144	N,M	131	N,M	144	N,M	144	N,M	144	N,M	144	N,M	144	N,M
4	146	M	146	M	146	M	146	M	146	M	146	M	146	M
5	157	M	157	M	157	M	160	M	157	M	157	M	157	M
6	59	M	59	M	59	M	59	M	59	M	59	M	59	M
7	160	M	160	M	160	M	160	M	160	M	160	M	160	M
8	150	M	150	M	150	M	150	M	150	M	150	M	150	M
9	134	M	137	M	137	M	136	M	137	M	137	M	137	M
10	147	M	147	M	147	M	147	M	147	M	147	M	147	M
11	102	M	102	M	102	M	102	M	102	M	102	M	102	M
12	58	M	58	M	58	M	58	M	58	M	58	M	58	M
13	102	M	102	M	102	M	102	M	102	M	102	M	102	M
14	38	M	38	M	38	M	38	M	38	M	38	M	38	M
15	127	M	127	M	127	M	127	M	127	M	127	M	127	M
16	171	M	171	M	168	M	168	M	171	M	171	M	171	M
17	132	M	132	M	132	M	132	M	132	M	132	M	132	M
18	110	M	110	M	110	M	110	M	110	M	110	M	107	M
19	61	M	82	M	61	M	61	M	61	M	61	M	61	M
20	178	M,I	178	M,I	178	M,I	178	M,I	178	M,I	178	M,I	178	M,I
21	194	I	206	I	206	I	206	I	251	I	206	I	206	I
22	120	I	120	I	120	I,C	120	I,C	120	I,C	120	I,C	120	I,C
23	99	U	99	U	99	C	99	C	99	C	99	C	99	C
24	213	C	213	C	213	C	213	C	213	C	288	C	216	C
25	140	C,T	140	C	140	C	140	C	153	C	153	C	140	C
26	112	T	94	C,T	12	C	115	C	54	C	150	C	102	C
27	45	T	168	T	45	C,T	45	C,T	203	C	165	C	109	C,T
28	84	T	144	T	63	T	51	T	94	C,T	140	C	45	T
29	198	T	201	T	171	T	171	T	60	T	115	C,T	60	T
30	144	T	138	T	153	T	150	T	78	T	21	T	171	T
31	162	T	71	T	201	T	192	T	182	T	78	T	156	T
32	111	T	46	T	129	T	129	T	187	T	171	T	207	T
33	71	T	57	T	71	T	71	T	177	T	153	T	150	T
34	100	T	57	T	97	T	97	T	78	T	177	T	71	T
35	57	T	81	T	57	T	57	T	50	T	291	T	100	T
36	57	T	83	T	57	T	57	T	97	T	71	T	57	T
37	81	T	112	T	81	T	164	T	57	T	100	T	57	T
38	65	T			83	T	169	T	57	T	57	T	81	T
39	118	T			112	T			81	T	57	T	83	T
40									77	T	81	T	133	T
41									115	T	77	T
42											115	T
	At XIC		At XIE		At XIJ		At MYA1		At XI-I		At XIK
No.	Size	Domain	Size	Domain	Size	Domain	Size	Domain	Size	Domain	Size	Domain
1	52	N	12	N	126	N	180	N,M	144	N	55	N
2	104	N	129	N	144	N,M	138	M	126	N,M	119	N
3	144	N,M	144	N,M	146	M	146	M	146	M	144	N,M
4	146	M	146	M	157	M	157	M	157	M	146	M
5	157	M	157	M	59	M	92	M	59	M	157	M
6	59	M	59	M	160	M	160	M	156	M	110	M
7	160	M	160	M	150	M	150	M	150	M	160	M
8	150	M	150	M	137	M	137	M	137	M	150	M
9	137	M	137	M	147	M	147	M	147	M	137	M
10	147	M	147	M	102	M	102	M	102	M	111	M
11	102	M	102	M	58	M	58	M	58	M	102	M
12	58	M	58	M	102	M	102	M	102	M	58	M
13	242	M	102	M	38	M	38	M	38	M	102	M
14	127	M	38	M	127	M	127	M	131	M	38	M
15	171	M	127	M	168	M	171	M	122	M	127	M
16	132	M	171	M	132	M	132	M	36	M	159	M
17	110	M	132	M	110	M	110	M	132	M	108	M
18	61	M	110	M	61	M	61	M	110	M	110	M
19	178	M,I	61	M	178	M,I	313	M	61	M	61	M
20	206	I	178	MI	206	I	206	M,I	178	M,I	178	M
21	120	I	206	I	120	I,C	120	I	206	I	239	I
22	99	C	120	I,C	651	C	99	I,C	120	I,C	120	I
23	222	C	99	C	140	C,T	219	C	99	C	99	C
24	140	C	222	C	257	T	140	C	222	C	222	C
25	112	C,T	140	C	53	T	139	C,T	140	C	140	C
26	48	T	112	C,T			51	T	100	C,T	118	C
27	255	T	48	T			51	T	51	T	51	C,T
28	156	T	255	T			171	T	171	T	72	T
29	207	T	156	T			156	T	63	T	171	T
30	144	T	195	T			210	T	177	T	156	T
31	71	T	144	T			147	T	71	T	207	T
32	100	T	71	T			71	T	100	T	138	T
33	57	T	157	T			100	T	81	T	75	T
34	57	T	57	T			114	T	83	T	81	T
35	81	T	81	T			85	T	151	T	57	T
36	83	T	83	T			76	T			57	T
37	124	T	124	T			124	T			81	T
38											83	T
39											136	T
40
41
42

N, Amino-terminal sequence; M, motor domain; I, IQ domain; C, coiled-coil domain; U, undefined; T, tail domain. The size of the first and last exons in each gene reflects only the size of the coding region.

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