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Table 5a Correlation between EST match, gene prediction and hybridization analysis

From: Survey of transcripts in the adult Drosophila brain

Detected in

Accession number

Insert size

Percentage of category

Novel cDNA

   Body

AF171819

145

12%

   Body

AF171858

186

 

   Both

AF171764

450

12%

   Both

AF171805

259

 

   Brain

AF171789

857

35%

   Brain

AF171794

610

 

   Brain

AF171800

190

 

   Brain

AF171808

269

 

   Brain

AF171815

363

 

   Brain

AF171854

195

 

   Neither

AF171813

216

41%

   Neither

AF171821

359

 

   Neither

AF171828

189

 

   Neither

AF171838

430

 

   Neither

AF171850

1104

 

   Neither

AF171859

1786

 

   Neither

AF171865

452

 

Matched with an EST, but NOT a predicted gene

   Body

AF171857

432

4%

   Both

AF171772

480

32%

   Both

AF171779

1101

 

   Both

AF171787

449

 

   Both

AF171804

553

 

   Both

AF171818

180

 

   Both

AF171839

1282

 

   Both

AF171848

345

 

   Both

AF171860

151

 

   Brain

AF171766

798

36%

   Brain

AF171780

292

 

   Brain

AF171781

400

 

   Brain

AF171782

506

 

   Brain

AF171785

727

 

   Brain

AF171796

313

 

   Brain

AF171797

400

 

   Brain

AF171811

386

 

   Brain

AF171863

1072

 

   Neither

AF171826

683

28%

   Neither

AF171829

380

 

   Neither

AF171837

503

 

   Neither

AF171840

623

 

   Neither

AF171845

376

 

   Neither

AF171862

800

 

   Neither

AF171869

641

 

Matched with a predicted gene, but NOT an EST

   Body

AF171867

287

8.3%

   Both

AF171768

1746

33.3%

   Both

AF171778

389

 

   Both

AF171790

396

 

   Both

AF171799

819

 

   Brain

AF171771

1060

33.3%

   Brain

AF171783

373

 

   Brain

AF171803

688

 

   Brain

AF171812

338

 

   Neither

AF171832

338

25%

   Neither

AF171861

398

 

   Neither

AF171868

689

 

Matched with an EST and a predicted gene

   Body

AF171846

578

3%

   Body

AF171856

600

 

   Both

AF171763

236

30%

   Both

AF171770

919

 

   Both

AF171773

315

 

   Both

AF171774

745

 

   Both

AF171776

278

 

   Both

AF171777

165

 

   Both

AF171786

223

 

   Both

AF171791

451

 

   Both

AF171792

619

 

   Both

AF171793

234

 

   Both

AF171795

200

 

   Both

AF171798

733

 

   Both

AF171809

577

 

   Both

AF171810

966

 

   Both

AF171817

250

 

   Both

AF171830

567

 

   Both

AF179229

1396

 

   Both

AF179230

168

 

   Brain

AF171761

1081

27%

   Brain

AF171762

652

 

   Brain

AF171765

281

 

   Brain

AF171767

228

 

   Brain

AF171769

1051

 

   Brain

AF171775

523

 

   Brain

AF171788

1421

 

   Brain

AF171801

600

 

   Brain

AF171802

623

 

   Brain

AF171806

727

 

   Brain

AF171807

380

 

   Brain

AF171814

237

 

   Brain

AF171816

324

 

   Brain

AF171822

376

 

   Brain

AF171824

785

 

   Brain

AF171833

868

 

   Neither

AF171784

351

40%

   Neither

AF171820

427

 

   Neither

AF171823

234

 

   Neither

AF171825

675

 

   Neither

AF171827

253

 

   Neither

AF171831

222

 

   Neither

AF171834

240

 

   Neither

AF171835

916

 

   Neither

AF171836

406

 

   Neither

AF171841

436

 

   Neither

AF171842

331

 

   Neither

AF171843

99

 

   Neither

AF171844

764

 

   Neither

AF171847

301

 

   Neither

AF171849

193

 

   Neither

AF171851

364

 

   Neither

AF171852

364

 

   Neither

AF171853

473

 

   Neither

AF171855

991

 

   Neither

AF171864

541

 

   Neither

AF171866

412

 

   Neither

AF171870

399

 

   Neither

AF171871

488

 

   Neither

AF171872

546

 
  1. Hybridization results for the indicated cDNA categorized as 'novel cDNA'; 'matched with an EST, but not a predicted gene'; 'matched with a predicted gene, but not an EST'; or 'matched with an EST and a predicted gene' (see Table 2). Purified plasmids containing the indicated insert sequence were hybridized with either labeled brain or body cDNA (see Table 6). The percentage of clones exhibiting the indicated hybridization pattern within each category is indicated.