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Table 5a Correlation between EST match, gene prediction and hybridization analysis

From: Survey of transcripts in the adult Drosophila brain

Detected in Accession number Insert size Percentage of category
Novel cDNA
   Body AF171819 145 12%
   Body AF171858 186  
   Both AF171764 450 12%
   Both AF171805 259  
   Brain AF171789 857 35%
   Brain AF171794 610  
   Brain AF171800 190  
   Brain AF171808 269  
   Brain AF171815 363  
   Brain AF171854 195  
   Neither AF171813 216 41%
   Neither AF171821 359  
   Neither AF171828 189  
   Neither AF171838 430  
   Neither AF171850 1104  
   Neither AF171859 1786  
   Neither AF171865 452  
Matched with an EST, but NOT a predicted gene
   Body AF171857 432 4%
   Both AF171772 480 32%
   Both AF171779 1101  
   Both AF171787 449  
   Both AF171804 553  
   Both AF171818 180  
   Both AF171839 1282  
   Both AF171848 345  
   Both AF171860 151  
   Brain AF171766 798 36%
   Brain AF171780 292  
   Brain AF171781 400  
   Brain AF171782 506  
   Brain AF171785 727  
   Brain AF171796 313  
   Brain AF171797 400  
   Brain AF171811 386  
   Brain AF171863 1072  
   Neither AF171826 683 28%
   Neither AF171829 380  
   Neither AF171837 503  
   Neither AF171840 623  
   Neither AF171845 376  
   Neither AF171862 800  
   Neither AF171869 641  
Matched with a predicted gene, but NOT an EST
   Body AF171867 287 8.3%
   Both AF171768 1746 33.3%
   Both AF171778 389  
   Both AF171790 396  
   Both AF171799 819  
   Brain AF171771 1060 33.3%
   Brain AF171783 373  
   Brain AF171803 688  
   Brain AF171812 338  
   Neither AF171832 338 25%
   Neither AF171861 398  
   Neither AF171868 689  
Matched with an EST and a predicted gene
   Body AF171846 578 3%
   Body AF171856 600  
   Both AF171763 236 30%
   Both AF171770 919  
   Both AF171773 315  
   Both AF171774 745  
   Both AF171776 278  
   Both AF171777 165  
   Both AF171786 223  
   Both AF171791 451  
   Both AF171792 619  
   Both AF171793 234  
   Both AF171795 200  
   Both AF171798 733  
   Both AF171809 577  
   Both AF171810 966  
   Both AF171817 250  
   Both AF171830 567  
   Both AF179229 1396  
   Both AF179230 168  
   Brain AF171761 1081 27%
   Brain AF171762 652  
   Brain AF171765 281  
   Brain AF171767 228  
   Brain AF171769 1051  
   Brain AF171775 523  
   Brain AF171788 1421  
   Brain AF171801 600  
   Brain AF171802 623  
   Brain AF171806 727  
   Brain AF171807 380  
   Brain AF171814 237  
   Brain AF171816 324  
   Brain AF171822 376  
   Brain AF171824 785  
   Brain AF171833 868  
   Neither AF171784 351 40%
   Neither AF171820 427  
   Neither AF171823 234  
   Neither AF171825 675  
   Neither AF171827 253  
   Neither AF171831 222  
   Neither AF171834 240  
   Neither AF171835 916  
   Neither AF171836 406  
   Neither AF171841 436  
   Neither AF171842 331  
   Neither AF171843 99  
   Neither AF171844 764  
   Neither AF171847 301  
   Neither AF171849 193  
   Neither AF171851 364  
   Neither AF171852 364  
   Neither AF171853 473  
   Neither AF171855 991  
   Neither AF171864 541  
   Neither AF171866 412  
   Neither AF171870 399  
   Neither AF171871 488  
   Neither AF171872 546  
  1. Hybridization results for the indicated cDNA categorized as 'novel cDNA'; 'matched with an EST, but not a predicted gene'; 'matched with a predicted gene, but not an EST'; or 'matched with an EST and a predicted gene' (see Table 2). Purified plasmids containing the indicated insert sequence were hybridized with either labeled brain or body cDNA (see Table 6). The percentage of clones exhibiting the indicated hybridization pattern within each category is indicated.
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