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Table 1 Primers used for construction of the deletion vectors and for PCR analysis

From: Both subtelomeric regions are required and sufficient for specific DNA fragmentation during macronuclear development in Stylonychia lemnae

  

Different deletion constructs

Primer

Sequence

pCE12

pCE18

pCE19

pCE20

α1-GFPtel-

P4

5'-GGATCCATCAGATAACTCGCAAC

5'

    

P548

5'-CTGCAGGTCGACTCTAGAGCTC

     

P7

5'-CAGATACAACGTCCCTCAAC

     

P8

5'-GCGGGATCCATCTTCATTTAAACTAGATG

 

3'

3'

3'

 

P9

5'-GGCTCGAGTTGCTACTCTCAGATATTC

     

P15

5'-CGGAGGTACCCCGATATTTAAAATCATTAATC

3'

    

P20

5'-CCGCAGGATCCTTGAGAGTCTGCCATTTAAC

 

5'

   

P23

5'-GTTAAATGGCAGACTCTCAAGAAGAAATGC

     

P25

5'-CCGGATCCAGACTTTCAGAGCGATATCTAG

  

5'

  

P26

5'-GCGGATCCCTCTCAAAGTGTGACATATTCC

   

5'

 

P27

5'-CGCAGGATCCAGAACAGTGGATTCGGAGGGAAATC

    

5'

P28

5'-CCGAGGTACCGAGATAGAATCGATTAAATAATGGG

    

3'

pGFP2

5'-CGCGAATTCTCACTTGTACAGCTCCTCCATG

     

pUCP1

5'-GTCGACCTGCAGGCATGCAAGCTT

     

pUCP2

5'-CGGGTACCGAGCTCGAATTC

     

pGEMP1

5'-CGCATGCTCCTCTAGACTCGAGGAATTCGG

     

pGEMP2

5'-GCTATGCATCCAACGCGTTGGGAGCTCTCC

     

PMUT2

5'-GGTCAGAAATACTAGTTGATTCAGATAAGAAAG

     
  1. Sequences of the primers used for construction of the different deletion vectors and for PCR analysis after injection of these constructs into the developing macronucleus. The 5' and 3' primers used for construction of each deletion vector are indicated.