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Table 1 Major characteristics of the ANU265 shotgun library

From: Genetic snapshots of the Rhizobiumspecies NGR234 genome

M13 insert size (range in bp)

 

900-1,500

Number of forward-sequencing reactions (M13 primers)

 

2,856

   Number of sequences stored in database

 

2,275

   Average length of the edited reads (bp)

 

253

Homology searches

  

   Total number of sequences

2,275

(100%)

   Sequences matching:

  

rDNA

3

(0.1%)

tRNA

4

(0.1%)

repeated sequences / intergenic elements only

29

(1.3%)

protein-coding-genes of: known function

922

(40.5%)

unknown function

208

(9.0%)

No database match (pioneer sequences)

1,109

(49.0%)