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Table 1 Main average indices for different sequencing strategies for 100 genomes (400-bp read length)

From: A cost-effective and universal strategy for complete prokaryotic genome sequencing proposed by computer simulation

ST

GCE (%)

SBE (%)

IDR (%)

FLT (%)

FDT (%)

CN

NB

SN

6xSE+10xPE

98.26971

0.004915

0.000364

0.310807

0.4678237

50.94

331136.7

3.64

10xSE+10xPE

98.30248

0.004265

0.000322

0.2626039

0.5629617

44.75

383793.6

3.51

15xSE+10xPE

98.32861

0.003293

0.000294

0.2518801

0.6041274

43.12

397060.7

3.48

20xSE+10xPE

98.35117

0.00227

0.000293

0.2307405

0.6301239

42.3

411169.2

3.66

  1. ST: Sequencing Strategy; GCE: Genome Coverage Rage; SBE: Single Base Error Rate; IDR: Indel Error Rate; FLT: False Gene Duplication Rate; FDT: False Gene Loss Rate; CN: Contig Number; NB: Contig N50 Size (bp); SN: Scaffold Number.