Fig. 1
From: DNA methylation remodeling and the functional implication during male gametogenesis in rice
DNA cytosine methylation in rice meiocytes, unicellular microspores, sperms. a Violin plots showing overall cytosine methylation levels (mCG, mCHG, and mCHH) in transposable elements (TE), transposable gene (TEG) and protein coding gene (Gene) of rice Zhonghua 11 (ZH11) meiocyte (Me), unicellular microspore (UM) and sperm (S). Values of the methylomes are averages from the two replicates. The average methylation levels (white dots) and median values (black bars) are indicated. b Density plot showing the frequency distribution of fractional methylation difference between the indicated samples. c Numbers of differentially methylated regions (DMRs) of between the indicated comparisons, distributed in TE (> 500 bp), TEG, gene, and intergenic regions. DMRs located in TE (red), gene (light green), intergenic region (pink), and TEG (yellow) are shown. d Genome browser screenshots of mCG, mCHG, and mCHH in meiocytes (Me), unicellular microspore (UM), sperm (S). Differentially methylated regions are grey colored