Fig. 4
From: Multi-slice spatial transcriptome domain analysis with SpaDo
The batch effects evaluation of SpaDo and other existing methods for multi-slice domain detection. a Umap of SpaDo on four DLPFC slices (colored by slices). b Umap of SEDR and SpaGCN with and without harmony on four DLPFC slices (colored by slices). c Umap and hierarchical clustering result of SpaDo on four DLPFC slices (colored by detected spatial domains). d Locations of spatial domains detected by SpaDo on four DLPFC slices. e Locations of spatial domains detected by SEDR incorporated with harmony on four DLPFC slices. f Locations of spatial domains detected by SpaGCN incorporated with harmony on four DLPFC slices