Fig. 2
From: Multi-slice spatial transcriptome domain analysis with SpaDo
SpaDo outperforms existing single-slice spatial domain detection methods. a Performance of SpaDo and other methods (Scanpy, Seurat v4, SEDR, SpaGCN, and STAGATE) on three single-cell spatial transcriptomic datasets. ARI adjust rand index. b Performance of SpaDo and other methods (Scanpy, Seurat v4, SpaGCN, SEDR, and BayesSpace) on 12 spot resolution spatial transcriptomic datasets. c Single CPU (SpaDo, Scanpy, Seurat v4, SpaDo, BayesSpace) and single GPU (SpaGCN, SEDR, STAGATE) runtime when tested in DLPFC_151673 data (3639 spots). d Single CPU (SpaDo, Scanpy, Seurat v4, SpaDo, BayesSpace) and single GPU (SpaGCN, SEDR, STAGATE) memory usage when tested in DLPFC_151673 data. e Visualization of TLS-like domain detection of SpaDo and other methods (BayesSpace, SEDR, SpaGCN, Scanpy, and Seurat v4) on 4 RCC spatial transcriptomic datasets