Fig. 3
From: A comparison of marker gene selection methods for single-cell RNA sequencing data
Comparison of methods using simulated datasets. a Calculated recall for all methods on simulation scenarios based on all real datasets. The marker genes selected based on the simulation model parameters are used as the ground truth. Methods are ranked top to bottom in the heatmap by median recall across scenarios. b As in (a) but now with precision. c As in (b) but calculating F1 score. These results average over simulated clusters and simulation replicates and are conducted with 20 genes selected and a location parameter for the DE factor in the splat simulation model of 3