Performance of computational algorithms to deconvolve heterogeneous bulk ovarian tumor tissue depends on experimental factors

Table 2 Deconvolution methods. All methods used are open source and return proportional estimates of the total composition of a tissue sample

Method	Implemented by	Uses scRNA-seq data	Availability
BayesPrism	Chu et al. 2022 [11]	Yes	R package
Bisque	Jew et al. 2020 [12]	Yes	R package
CIBERSORTx	Newman et al. 2019 [13]	Yes	Web app
EPIC	Racle et al. 2017 [14]	No	R package
MuSiC	Wang et al. 2019 [15]	Yes	R package
NNLS	Mullen and van Stokkum 2012 [59]	Yes	R package

ISSN: 1474-760X