Fig. 3
From: GET_PANGENES: calling pangenes from plant genome alignments confirms presence-absence variation
Multiple alignment of protein sequences encoded in barley pangene cluster Horvu_MOREX_1H01G011400, produced with Clustalx. This cluster contains isoforms from 13 gene models, but none from genotype OUN333. The last sequence is encoded by a CDS sequence lifted-over from cultivar HOR3081 on the genome of OUN3, spanning 3 exons (exon boundaries are marked with asterisks. B, Patch GFF file with the coordinates of the exons lifted-over from gene model Horvu_3081_1H01G015200. The underlying CDS nucleotide sequence was aligned with 411 matches, no indels and no mismatches with check_evidence.pl -f