Skip to main content
Fig. 3 | Genome Biology

Fig. 3

From: GeneSegNet: a deep learning framework for cell segmentation by integrating gene expression and imaging

Fig. 3

Examples of cell segmentation in the simulation dataset. The first row shows the original image and the second row shows the ground truth. Other rows show the results from cell segmentation methods. Each column is an example. The detected cell boundaries are marked in red. Light blue dots represent RNAs falling within cell boundaries. Yellow dots represent RNAs falling outside of cell boundaries. a Sparsely distributed cells with high image noise and abundant amount of genes. b Sparsely distributed cells with low image noise and depleted amount of genes. c Densely distributed cells with high image noise and abundant amount of genes. d Densely distributed cells with low image noise and depleted amount of genes

Back to article page

Genome Biology

ISSN: 1474-760X

Contact us