From: Ariadne: synthetic long read deconvolution using assembly graphs
Dataset | Search distance (bp) | Time (HH:MM) | Memory (GB) | Threads |
---|---|---|---|---|
MOCK5 10x | Assembly | 10:16 | 103 | 20 |
MOCK5 10x | 5000 | 00:48 | 56 | 20 |
MOCK5 10x | 10000 | 00:53 | 56 | 20 |
MOCK5 10x | 15000 | 01:16 | 56 | 20 |
MOCK5 10x | 20000 | 00:56 | 56 | 20 |
MOCK5 10x | Reference | 18:28 | 100 | 20 |
MOCK5 LoopSeq | Assembly | 01:13 | 22 | 20 |
MOCK5 LoopSeq | 5000 | 00:44 | 40 | 20 |
MOCK5 LoopSeq | 10000 | 02:04 | 40 | 20 |
MOCK5 LoopSeq | 15000 | 03:00 | 41 | 20 |
MOCK5 LoopSeq | 20000 | 01:51 | 41 | 20 |
MOCK5 LoopSeq | Reference | 03:39 | 100 | 20 |
MOCK20 10x | Assembly | 06:39 | 58 | 20 |
MOCK20 10x | 5000 | 00:44 | 54 | 20 |
MOCK20 10x | 10000 | 01:09 | 54 | 20 |
MOCK20 10x | 15000 | 01:57 | 54 | 20 |
MOCK20 10x | 20000 | 02:38 | 54 | 20 |
MOCK20 10x | Reference | 15:07 | 100 | 20 |
MOCK20 TELL-Seq | Assembly | 04:09 | 57 | 20 |
MOCK20 TELL-Seq | 5000 | 01:53 | 56 | 20 |
MOCK20 TELL-Seq | 10000 | 03:47 | 56 | 20 |
MOCK20 TELL-Seq | 15000 | 08:57 | 56 | 20 |
MOCK20 TELL-Seq | 20000 | 11:44 | 57 | 20 |
MOCK20 TELL-Seq | Reference | 14:36 | 100 | 20 |