Fig. 7
From: vamos: variable-number tandem repeats annotation using efficient motif sets
vamos workflow of one VNTR locus. A Processing and filtering. TRF may report multiple potentially overlapping annotations or not annotate the entire VNTR sequence. So, for each assembly consensus motifs from all TRF annotations are collected to re-annotated the full VNTR sequence by StringDecomposer. Motifs resulted from re-annotation are combined across assemblies as the original motif database. B Efficient motif selection. An efficient motif set is selected as a subset of the original motif set under a parameter q representing the compression strength. C New sequence annotation. New sequences are annotated by StringDecomposer algorithm into a string of efficient motifs that is closest to the raw nucleotide sequence by edit distance