Fig. 1From: A benchmark for RNA-seq quantification pipelinesEstimated log fold changes stratified by transcript abundance on simulation dataset. One example based on Cufflinks quantification of two samples is shown here. Black points are non-differential transcripts; blue points are differentially expressed transcripts which were simulated to have signals on both samples; red points are differentially expressed transcripts which were simulated to have signals in only one of the samplesBack to article page