Figure 8
From: Deciphering clonality in aneuploid breast tumors using SNP array and sequencing data
Sample 5 grid plot. The small, regular grid suggests that a low fraction of the sample cells form an aneuploid subclone (A). The segments with minor array CNs far below the regular grid may be caused by LOH in a different, larger subclone. Segments are classified into types A (blue, regular grid pattern), B (pink, breaking regular grid pattern), C (green, lower array CNs than the most evident grid pattern) and D (red, high enough array CNs for regular grid patterns not to appear).