From: Reducing assembly complexity of microbial genomes with single-molecule sequencing
Organism | Genome Mbp | GC % | Class | PB CLR Gbp | PB % error (200×) | PB % >7 kbp (200×) | PB coverage >7 kbp (200×) | PB CCS Gbp | 454 Gbp | MiSeq Gbp |
---|---|---|---|---|---|---|---|---|---|---|
Escherichia coli K12 MG1655 | 4.65 | 50% | I | 1.4 (294×) | 10.44 | 16.07 | 32.11× | 0.2 (44×) | 0.19 (42×) | 1.73 (372×) |
Escherichia coli O157:H7 F8092B [41] | 5.52 | 50% | III | 2.2 (397×) | 10.49 | 13.37 | 26.75× | NA | 0.22 (40×) | 0.65 (118×) |
Bibersteinia trehalosi USDA-ARS-USMARC-192 | 2.41 | 41% | I | 1.1 (439×) | 13.17 | 5.56 | 11.12× | 0.09 (35×) | 0.15 (59×) | 0.62 (247×) |
Mannheimia haemolytica USDA-ARS-USMARC-2286 | 2.55 | 41% | III | 0.5 (212×) | 10.46 | 23.06 | 47.12× | 0.1 (42×) | NA | 0.39 (85×) |
Francisella tularensis 99A-2628 | 1.90 | 32% | III | 0.7 (331×) | 11.82 | 8.52 | 17.03× | NA | 0.09 (40×) | 11.73 (5870×) |
Salmonella enterica Newport SN31241 [42] | 5.01 | 52% | I | 1.1 (217×) | 12.33 | 9.30 | 18.61× | 0.1 (22×) | 0.13 (25×) | 0.28 (56×) |