Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis

Table 4 Functional annotation of the predicted proteome from the N.

	N. sylvestrismerged	N. tomentosiformismerged
Unique IDs	38,940	38,648
EC numbers
Any EC assignment	12,220	11,951
3×EC assignments	7,793	7,611
... to unique proteins	7,554	7,397
3×EC assignments HC	4,117	4,069
...to unique proteins	4,061	4,008
Unique 3×EC numbers	148	150
4×EC assignments	4,427	4,340
...to unique proteins	4,203	4,120
4×EC assignments HC	3,096	3,120
...to unique proteins	2,989	3,007
Unique 4×EC	635	635
GO terms
Unique protein IDs	22,497	22,196
Unique protein IDs with a molecular function	19,852	19,551
Biological process	48,896	48,365
Molecular function	24,680	24,136
Cellular component	8,414	8,419

sylvestris and N. tomentosiformis assemblies
EFICAz^2.5 was used to assign Enzyme Commission (EC) numbers and InterProScan was used to assign GO terms assignments to the ORFs derived from the assemblies. HC, high confidence.

ISSN: 1474-760X