From: Functional analysis of transcription factor binding sites in human promoters
TF | Func. | Tested | Ubq.Func. | Ubq. Act. | Ubq. Rep. | Func. K562 | Func. HCT116 | Func HT1080 | Func HepG2 | PWM | AUC |
---|---|---|---|---|---|---|---|---|---|---|---|
CTCF | 104 | 168 | 9 | 9 | 0 | 62 | 52 | 49 | 53 | Ref. [31] | 0.84 |
E2F4 | 7 | 12 | 0 | 0 | 0 | 3 | 3 | 3 | 0 | E2F:4 M00739 | 0.83 |
E2F6 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | E2F:1 M00938 | 0.78 |
EGR1 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | Egr:3 M00245 | 0.76 |
GABP | 7 | 11 | 4 | 4 | 0 | 5 | 5 | 6 | 5 | Ref. [103] | 0.77 |
GATA1 | 4 | 4 | 1 | 1 | 0 | 4 | 4 | 1 | 1 | GATA:1 M00128 | 0.69 |
GATA2 | 47 | 80 | 4 | 3 | 1 | 36 | 20 | 18 | 14 | GATA:2 M00348 | 0.81 |
JUND | 3 | 3 | 1 | 1 | 0 | 2 | 2 | 1 | 3 | CREBP1 M00041 | 0.65 |
MAX | 3 | 3 | 1 | 0 | 1 | 2 | 2 | 2 | 2 | cMycMax M00118 | 0.77 |
STAT1 | 54 | 69 | 16 | 11 | 5 | 41 | 27 | 29 | 39 | STAT1 M00224 | 0.74 |
USF1 | 2 | 2 | 1 | 1 | 0 | 2 | 2 | 2 | 1 | USF M00121 | 0.86 |
YY1 | 86 | 98 | 26 | 9 | 16 | 63 | 56 | 53 | 58 | Ref. [103] | 0.82 |
Total | 320 | 455 | 63 | 39 | 23 | 221 | 174 | 165 | 176 | Â | Â |