Table 3 Non-synonymous single nucleotide variants unique to FVB/NJ, relative to the 17 Mouse Genomes Project strains [14], with Grantham matrix score >150
From: Sequencing and characterization of the FVB/NJ mouse genome
Chromosome | Position | Ref/FVB | Gene ID | Gene name | Description | GMS |
|---|---|---|---|---|---|---|
9 | 119518884 | C/A | ENSMUSG00000034533 | Scn10a | Sodium channel, voltage-gated, type X, alpha | 205 |
4 | 138523178 | G/T | ENSMUSG00000070661 | Rnf186 | Ring finger protein 186 | 205 |
19 | 13485488 | G/T | ENSMUSG00000063777 | Olfr1469 | Olfactory receptor 1469 | 205 |
7 | 19600268 | T/C | ENSMUSG00000040891 | Foxa3 | Forkhead box A3 | 194 |
15 | 101542878 | C/A | ENSMUSG00000061527 | Krt5 | Keratin 5 | 184 |
9 | 85738244 | C/T | ENSMUSG00000035274 | Tpbg | Trophoblast glycoprotein | 180 |
7 | 112715121 | G/A | ENSMUSG00000037032 | Apbb1 | Amyloid beta (A4) precursor protein-binding, family B, member 1 | 180 |
6 | 43230658 | C/T | ENSMUSG00000033542 | Arhgef5 | Rho guanine nucleotide exchange factor (GEF) 5 | 180 |
2 | 84642975 | C/T | ENSMUSG00000027078 | Ube2l6 | Ubiquitin-conjugating enzyme E2L 6 | 180 |
19 | 3356468 | C/T | ENSMUSG00000024900 | Cpt1a | Carnitine palmitoyltransferase 1a, liver | 180 |
19 | 16100043 | C/T | ENSMUSG00000049247 | Rpl37-ps1 | Ribosomal protein 37, pseudogene 1 | 180 |
4 | 118859970 | C/G | ENSMUSG00000028644 | Ermap | Erythroblast membrane-associated protein | 177 |
1 | 152466145 | C/A | ENSMUSG00000066842 | Hmcn1 | Hemicentin 1 | 160 |
19 | 13137960 | G/T | ENSMUSG00000060593 | Olfr1454 | Olfactory receptor 1454 | 159 |
19 | 12566519 | C/A | ENSMUSG00000039982 | Dtx4 | Deltex 4 homolog (Drosophila) | 159 |
18 | 14002581 | C/A | ENSMUSG00000024420 | Zfp521 | Zinc finger protein 521 | 159 |
9 | 38623499 | C/T | ENSMUSG00000043911 | Olfr922 | Olfactory receptor 922 | 155 |
1 | 168031022 | T/A | ENSMUSG00000026564 | Dusp27 | Dual specificity phosphatase 27 (putative) | 152 |