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Table 3 Inversion prediction in individual NA18507

From: An integrative probabilistic model for identification of structural variation in sequencing data

Method

Minimum number to detect 2

Minimum number to detect 3

High quality alignments

  

   Breakdancer

138

NA

   GASV

72

NA

   GASVPro-HQ

61

NA

   Hydra-HQ

43

NA

All alignments

  

   GASVPro

141

286

   GASVPro-Min2

141

286

   Hydra

551

752

  1. We report the minimum number of predictions required to predict two or three known inversions from a set of ten previously validated inversions [16]. NA, not applicable.