| AS | AS events | ||||
---|---|---|---|---|---|---|
 | genes | IR | ES | Alt. 5' | Alt. 3' | Total |
A. thaliana models | 4,029 | 1,987 (33%) | 550 (9%) | 1,256 (21%) | 2,145 (36%) | 5,938 |
   SpliceGrapher |  |  |  |  |  |  |
No ESTs | 4,901 | 2,248 (30%) | 714 (10%) | 1,560 (21%) | 2,866 (39%) | 7,388 |
Novel | 885 | 308 (21%) | 164 (11%) | 304 (20%) | 721 (48%) | 1,497 |
With ESTs | 6,162 | 3,658 (33%) | 994 (9%) | 2,335 (21%) | 4,128 (37%) | 9,916 |
Novel | 2,154 | 1,779 (34%) | 444 (8%) | 1,079 (20%) | 1,983 (38%) | 5,285 |
   Cufflinks |  |  |  |  |  |  |
No gene models | 1,263 | 449 (32%) | 383 (28%) | 237 (17%) | 319 (23%) | 1,388 |
Novel | 699 | 429 (32%) | 380 (28%) | 232 (17%) | 304 (23%) | 1,345 |
With gene models | 6,056 | 4,029 (39%) | 2,857 (27%) | 1,427 (14%) | 2,106 (20%) | 10,419 |
Novel | 2,319 | 2,232 (38%) | 2,550 (43%) | 552 (9%) | 594 (10%) | 5,928 |
   TAU |  |  |  |  |  |  |
No gene models | 2,777 | 893 (17%) | 475 (9%) | 1,481 (27%) | 2,555 (47%) | 5,404 |
Novel | 1,591 | 811 (16%) | 460 (9%) | 1,431 (28%) | 2,351 (47%) | 5,053 |
With gene models | 10,458 | 94,571 (85%) | 598 (1%) | 5,972 (5%) | 9,820 (9%) | 110,961 |
Novel | 8,364 | 94,124 (86%) | 476 (0%) | 5,697 (5%) | 9,219 (8%) | 109,516 |
V. vinifera models | 0 | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 |
   SpliceGrapher | 2,039 | 347 (13%) | 830 (31%) | 640 (24%) | 838 (32%) | 2,655 |
   TAU |  |  |  |  |  |  |
No gene models | 3,099 | 531 (10%) | 684 (13%) | 1,321 (25%) | 2,743 (52%) | 5,279 |
With gene models | 15,874 | 135,585 (72%) | 4,938 (3%) | 23,615 (13%) | 24,406 (13%) | 188,544 |
   Cufflinks |  |  |  |  |  |  |
No gene models | 1,057 | 324 (24%) | 519 (39%) | 140 (11%) | 349 (26%) | 1,332 |
With gene models | 4,263 | 4,120 (34%) | 3,148 (26%) | 2,165 (18%) | 2,818 (23%) | 12,251 |