| Sample | |||||
---|---|---|---|---|---|---|
 | 5330 (hbck) | 6246 (sunk) | 8568 (lear) | 12856 (shep) | 13782 (aphl) | 13716 (vgim) |
Targeted exons | 203,224 | 203,224 | 203,224 | 203,224 | 203,224 | 203,224 |
Final target bases | 54,367,244 | 54,367,244 | 54,367,244 | 54,367,244 | 54,367,244 | 54,367,244 |
Target bases covered | 52,934,978 | 52,493,811 | 52,832,014 | 52,647,881 | 52,664,921 | 53,004,900 |
Percentage target bases covered | 97.37 | 96.55 | 97.18 | 96.84 | 96.87 | 97.49 |
Target bases not covered | 1,432,266 | 1,873,433 | 1,535,230 | 1,719,363 | 1,702,323 | 1,362,344 |
Percentage target bases not covered | 2.63 | 3.45 | 2.82 | 3.16 | 3.13 | 2.51 |
Total readsa | 39,675,108 | 39,641,830 | 31,817,686 | 42,405,386 | 59,956,764 | 67,359,382 |
Number of reads in target regions | 23,319,015 | 23,335,916 | 19,211,748 | 25,227,205 | 36,227,876 | 39,948,582 |
Percentage reads in target regions | 58.77 | 58.87 | 60.38 | 59.49 | 60.42 | 59.31 |
Average coverage | 32.72 | 32.59 | 26.75 | 35.32 | 50.78 | 56.31 |
Median coverage | 30.33 | 30.02 | 23.23 | 33.02 | 46.61 | 50.02 |
Coverage at 20× | 76.4 | 73.6 | 61.9 | 77.5 | 85.8 | 88 |
Coverage at 10× | 92.1 | 89.3 | 87.1 | 90.7 | 92.9 | 94.5 |
Coverage at 5× | 95.7 | 93.8 | 94.3 | 94.4 | 95.1 | 96.2 |
Coverage at 1× | 97.4 | 96.6 | 97.2 | 96.8 | 96.9 | 97.5 |
NC80 | 0.51 | 0.47 | 0.46 | 0.49 | 0.47 | 0.46 |
1/NC80 | 1.94 | 2.13 | 2.18 | 2.06 | 2.13 | 2.17 |