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Table 1 Number of GWW motifs found in all transcripts and among Gis2p targets

From: Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins

Motif

Location

Number of motifsa

Number of Gis2 targets

P-valueb

(GWW)3

ORF

3,550

606

0.7

 

3'-UTR

347

77

0.01

 

5'-UTR

191

26

0.24

(GWW)4

ORF

1,057

235

2 Ă— 10-8

 

3'-UTR

55

22

4 Ă— 10-5

 

5'-UTR

20

3

1

(GWW)5

ORF

280

106

1 Ă— 10-17

 

3'-UTR

10

1

1

 

5'-UTR

1

 

1

(GWW)6

ORF

106

55

9 Ă— 10-17

 

3'-UTR

4

  
 

5'-UTR

1

  

(GWW)7

ORF

61

34

5 Ă— 10-12

 

3'-UTR

4

  

(GWW)8

ORF

35

20

8 Ă— 10-8

 

3'-UTR

3

  
  1. aORFs from SGD (5,885 genes), UTR sequences from [43]. bProbability that motifs are enriched in Gis2p targets by chance (Fisher's test).