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Table 1 Human unitary pseudogenes

From: Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates

Human unitary pseudogene genomic location

Mouse ortholog symbol

Mouse gene name

chr12+:110821507-110823878

Adam1b

a disintegrin and metallopeptidase domain 1b

chr8+:17371392-17373372

Adam26B

a disintegrin and metallopeptidase domain 26B

chr8-:39450156-39489335

Adam3

a disintegrin and metallopeptidase domain 3 (cyritestin)

chr8+:39299218-39358412

Adam5

a disintegrin and metallopeptidase domain 5

chr9-:103136199-103141451

Acnat2

acyl-coenzyme A amino acid N-acyltransferase 2

chr18+:54814947-54887164

Acyl3

acyltransferase 3 [RIKEN cDNA 5330437I02 gene]

chr1+:92304452-92305907

Aytl1b

acyltransferase like 1B

chr11+:71909632-71910345

Art2b

ADP-ribosyltransferase 2b

chr2+:201166115-201364602

Aox3l1

aldehyde oxidase 3-like 1

chr16+:2351147-2415839

Abca17

ATP-binding cassette, sub-family A (ABC1), member 17

chr1-:51789487-51812353

Calr4

calreticulin 4

chr16-:30823174-30826438

Ctf2

cardiotrophin 2

chr4-:123871155-123872802

Cetn4

centrin 4

chr19-:46006279-46009136

Cyp2t4

cytochrome P450, family 2, subfamily t, polypeptide 4

chr2-:178665477-178677441

Cyct

cytochrome c, testis

chr4-:68540001-68564082

Desc4

Desc4 [RIKEN cDNA 9930032O22 gene]

chr11-:67136888-67140266

Doc2 g

double C2, gamma

chr9+:35423704-35439561

Feta

Feta [RIKEN cDNA 4930417 M19 gene]

chr10-:114057930-114106344

Gucy2 g

guanylate cyclase 2 g

chr8:27473706-27502505

Gulo

gulonolactone (L-) oxidase

chr1-:226718541-226718916

Hist3 h2ba

histone cluster 3, H2ba

chr7+:123241442-123256569

Hyal6

hyaluronoglucosaminidase 6

chr9-:114761447-114764366

Mup4

major urinary protein 4

chr10+:81670064-81672769

Mbl1

mannose binding lectin (A) 1

chr6+:118061593-118072916

Nepn

nephrocan

chr3+:47028800-47029644

Nradd

neurotrophin receptor associated death domain

chr1+:115181467-115195621

Nr1 h5

nuclear receptor subfamily 1, group H, member 5

chrX+:101400687-101403403

Prame

preferentially expressed antigen in melanoma

chr1+:200404371-200425048

Ptprv

protein tyrosine phosphatase, receptor type, V

chr5+:140786050-140870922

Pcdhgb8

protocadherin gamma subfamily B, 8

chr19+:53875091-53876096

Sec1

secretory blood group 1

chr20-:1696610-1708642

Sirpb3

Sirpb3 [RIKEN cDNA F830045P16 gene]

chr2+:20449670-20459798

Slc7a15

solute carrier family 7 (cationic amino acid transporter, y+ system), member 15

chr4-:70692183-70714196

Sult1d1

sulfotransferase family 1D, member 1

chr7+:142844251-142845153

Tas2r134

taste receptor, type 2, member 134

chr17+:59285910-59292052

Tcam1

testicular cell adhesion molecule 1

chrX+:83901067-83903982

Tex16

testis expressed gene 16

chr14-:63882652-63893934

Tex21

testis expressed gene 21

chr8-:145268106-145414584

Tssk5

testis-specific serine kinase 5

chr17-:73756179-73757460

Tha1

threonine aldolase 1

chr1+:33704438-33707143

Tlr12

toll-like receptor 12

chr6:-132971083-132972109

Taar3

trace amine-associated receptor 3

chr6-:132957230-132958269

Taar4

trace amine-associated receptor 4

chr11+:3587708-3615320

Trpc2

transient receptor potential cation channel, subfamily C, member 2

chr4-:68314827-68322204

Tmprss11c

transmembrane protease, serine 11c

chr16-:2829662-2831734

Tmprss8

transmembrane protease, serine 8 (intestinal)

chr1-:84603696-84623086

Uox

urate oxidase

  1. See Table S2 in Additional file 1 for the list of 29 human unitary pseudogenes identified using unannotated mouse gene transcripts.