|  |  |  |  | MAF | Chi-square | Permutation | |||
---|---|---|---|---|---|---|---|---|---|---|
LD block | SNV-ID | Chr 3 coordinate | Gene location | Minor/major alleles | Cohort | Cases | Controls | P-value | OR | P-value |
Left | rs16830415 | 128956957 | Intron3 | C/T | 0.028 | 0.045 | 0.010 | 9.95E-03 | 4.59 | 8.00E-03 |
 | Chr3_128957192 | 128957192 | Intron3 | G/T | 0.028 | 0.045 | 0.010 | 9.95E-03 | 4.59 | 8.00E-03 |
 | Chr3_128958587 | 128958587 | Intron3 | C/T | 0.043 | 0.066 | 0.021 | 6.70E-03 | 3.39 | 5.00E-03 |
 | Chr3_128958866 | 128958866 | Intron3 | -/T | 0.08 | 0.049 | 0.1103 | 7.07E-03 | 0.41 | 7.40E-03 |
 | rs9832418 | 128961356 | Intron3 | C/T | 0.028 | 0.045 | 0.010 | 9.95E-03 | 4.59 | 8.00E-03 |
 | rs547801a | 128964929 | Intron3 | T/C | 0.029 | 0.049 | 0.010 | 5.93E-03 | 4.96 | 5.00E-03 |
 | rs520154a | 128965687 | Intron3 | A/G | 0.028 | 0.049 | 0.007 | 2.04E-03 | 7.46 | 1.20E-03 |
 | rs60963555 | 128967982 | Intron3 | T/C | 0.026 | 0.045 | 0.007 | 3.52E-03 | 6.91 | 1.60E-03 |
 | rs684358b | 128969940 | Intron3 | G/T | 0.028 | 0.049 | 0.007 | 2.04E-03 | 7.46 | 1.20E-03 |
 | rs9852837 | 128973744 | Intron3 | A/G | 0.028 | 0.045 | 0.010 | 9.95E-03 | 4.59 | 1.16E-02 |
Right | rs9289319 | 129009856 | Intron2 | G/A | 0.192 | 0.138 | 0.243 | 1.42E-03 | 0.50 | 1.80E-03 |
 | rs9289320 | 129010946 | Intron2 | G/C | 0.192 | 0.143 | 0.240 | 3.27E-03 | 0.53 | 6.00E-03 |
 | rs9289321 | 129011459 | Intron2 | A/G | 0.165 | 0.123 | 0.206 | 7.84E-03 | 0.54 | 9.80E-03 |
 | rs9877819c | 129012220 | Intron2 | A/G | 0.164 | 0.122 | 0.206 | 7.03E-03 | 0.54 | 7.40E-03 |
 | rs28753886 | 129013477 | Intron2 | A/G | 0.163 | 0.119 | 0.206 | 4.79E-03 | 0.52 | 5.60E-03 |
 | rs35948688 | 129014938 | Intron2 | C/T | 0.159 | 0.112 | 0.206 | 2.10E-03 | 0.49 | 2.40E-03 |
 | rs874546c | 129021102 | Intron2 | G/A | 0.183 | 0.140 | 0.226 | 8.99E-03 | 0.56 | 1.00E-02 |
 | rs2011138 | 129026619 | Upstream | A/C | 0.352 | 0.412 | 0.295 | 3.18E-03 | 1.68 | 4.40E-03 |
 | Chr3_129026621 | 129026621 | Upstream | A/G | 0.049 | 0.021 | 0.075 | 2.65E-03 | 0.27 | 4.00E-03 |
 | Chr3_129029015 | 129029015 | Upstream | A/G | 0.336 | 0.398 | 0.276 | 1.98E-03 | 1.74 | 3.60E-03 |