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Table 4 Assembly statistics for initial drafts and assisted assemblies for the 8× assembly of P. falciparum HB3, which has severe cloning bias

From: Assisted assembly: how to improve a de novo genome assembly by using related species

 

P. falciparum HB3 - 8× assembly

 

Initial draft

Assisted

Bases assembled (%)

85.6

93.4

Total contig length (Mb)

19.8

23.5

N50 contig (kb)

13.7

15.4

N50 scaffold gapped (kb)

17.0

48.8

N50 scaffold ungapped (kb)

16.8

47.5