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Table 1 Summary of clustered miRNAs in Arabidopsis thaliana , rice ( Oryza sativa ) and poplar ( Populus trichocarpa ) genomes2

From: Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins

 

Populus trichocarpa

Oryza sativa

Arabidopsis thaliana

Number of clusters with consecutive miRNAs at a distant of (same strand miRNAs):

   

   <1 kb

9 (9)

16 (14)

10 (8)

   <3 kb

14 (14)

16 (14)

13 (11)

   <10 kb

20 (20)

24 (22)

18 (16)

% of clustered miRNAs (number of clustered miRNAs/total miRNAs)

20% (47/234)

19% (68/353)

22% (42/187)

Maximal number of miRNAs encoded in a cluster (cluster size)

4 (4,593 bp)

8 (497 bp)

6 (5,522 bp)

% of clusters with (number/total of <10 kb miRNA clusters):

   

   A single miRNA family

90% (18/20)

75% (18/24)

61% (11/18)

   Conserved miRNAs

90% (18/20)

54% (13/24)

44% (8/18)

  1. Analyses were based on miRNA described in miRBase version 13.0 (March 2009).