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Table 11 E. huxleyi EST clusters related to Ca2+ and H+ transporters

From: Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell

Cluster ID

Number of 1N clusters

Number of 2N clusters

P-value

Top Swiss-Prot hit

E-value

Ca2+/H+ antiporter VCX1 and related proteins

     

   GS00019

7

1

0.020

CAX5_ARATH

2 × 10-66

   GS00304

0

4

0.031

CAX2_ARATH

3 × 10-60

   GS00617

3

0

0.063

VCX1_YEAST

3 × 10-58

   GS00976

2

1

0.313

VCX1_YEAST

3 × 10-31

   GS06500

0

1

0.250

CAX3_ORYSJ

4 × 10-30

Ca2+ transporting ATPase

     

   GS07761

1

0

0.250

AT2A2_CHICK

4 × 10-63

   GS01511

4

5

0.377

ECA4_ARATH

7 × 10-31

   GS05702

0

1

0.250

ECA4_ARATH

3 × 10-12

K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins

     

   GS05506

0

2

0.125

NCKX2_RAT

5 × 10-24

   GS00463

0

8

0.002

NCKXH_DROME

1 × 10-22

   GS04866

2

0

0.125

NCKX_DROME

2 × 10-22

   GS02609

1

0

0.250

NCKX3_HUMAN

8 × 10-20

   GS00834

4

3

0.364

NCKXH_DROME

2 × 10-18

   GS03656

4

1

0.110

NCKX3_MOUSE

6 × 10-7

Vacuolar H+-ATPase V0 sector, subunit a

     

   GS01798

2

0

0.125

VPP4_HUMAN

2 × 10-38

   GS02526

1

4

0.109

VPP4_HUMAN

9 × 10-40

   GS12017

0

1

0.250

No hit

 

   GS04358

1

0

0.250

VATM_DICDI

2 × 10-30

   GS08326

0

1

0.250

No hit

 

Vacuolar H+-ATPase V0 sector, subunit c"

     

   GS01501

4

0

0.031

VATO_YEAST

4 × 10-47

Vacuolar H+-ATPase V0 sector, subunit d

     

   GS00290

7

5

0.291

VA0D_DICDI

1 × 10-126

Vacuolar H+-ATPase V0 sector, subunit M9.7 (M9.2)

     

   GS11177

0

2

0.125

  

Vacuolar H+-ATPase V0 sector, subunits c/c'

     

   GS03783

1

0

0.250

VATL_PLECA

7 × 10-38

   GS01934

3

5

0.254

VATL_PLECA

4 × 10-38

Vacuolar H+-ATPase V1 sector, subunit A

     

   GS01727

2

5

0.144

VATA_CYACA

3 × 10-86

Vacuolar H+-ATPase V1 sector, subunit B

     

   GS08492

0

1

0.250

VATB_ARATH

1 × 10-62

Vacuolar H+-ATPase V1 sector, subunit C

     

   GS00316

6

4

0.275

VATC1_XENTR

6 × 10-41

Vacuolar H+-ATPase V1 sector, subunit E

     

   GS00924

1

1

0.500

VATE_MESCR

1 × 10-21

Vacuolar H+-ATPase V1 sector, subunit F

     

   GS09780

0

4

0.031

VATF_ARATH

3 × 10-32

Vacuolar H+-ATPase V1 sector, subunit H

     

   GS01820

1

5

0.062

VATH_MANSE

4 × 10-36

  1. Clusters are arranged by KOG hit classification. Clusters in bold were tested by RT-PCR.
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Genome Biology

ISSN: 1474-760X

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