Table 5 Characterization of our high ranking Oryza candidate G-protein coupled receptors
Locus | QFC | GPCRHMM | TMHMM | HMMTOP | Phobius | Pcut-T | Pcut-H | Query | e-value |
|---|---|---|---|---|---|---|---|---|---|
Upper bin | Â | Â | Â | Â | Â | Â | Â | Â | Â |
   Os01g54784.1 | * | * | 7 (out) | 7 (out) | 7 (out) |  |  | Cand3,4,5 | <e-85 |
   Os01g61970.1 | * | * | 8 (in) | 9 (out) | 7 (out) | 7 (out) | 7 (out) | Cand7 | e-150 |
   Os01g66190.1 | * | * | 7 (out) | 7 (out) | 7 (out) |  |  | Cand1 | e-65 |
   Os04g36630.1 | * | * | 7 (out) | 7 (out) | 7 (out) |  |  | Cand1 | e-60 |
   Os05g39730.1 | * | * | 6 (in) | 7 (out) | 7 (out) |  |  |  |  |
   Os06g04130.1 | * | * | 7 (in) | 9 (out) | 7 (out) | 6 (out) | 7 (out) | Cand7 | e-123 |
   Os06g09930.1 | * | * | 7 (out) | 7 (out) | 7 (out) | 7 (out) | 7 (out) | GCR1 | e-120 |
Lower bin | Â | Â | Â | Â | Â | Â | Â | Â | Â |
   Os03g36790.1 | * | -0.81 | 8 (in) | 8 (in) | 7 (out) | 7 (out) | 7 (out) |  |  |
   Os07g01250.1 | * | -1.16 | 7 (out) | 7 (out) | 7 (out) |  |  |  |  |
   Os02g40550.1 | * | -1.17 | 8 (in) | 8 (in) | 7 (out) | 7 (out) | 7 (out) | Cand7 | e-111 |
   Os04g42960.1 | * | -4.39 | 8 (in) | 9 (out) | 7 (out) | 7 (out) | 8 (in) | Cand7 | e-120 |
   Os03g54920.1 | * | -8.01 | 7 (in) | 6 (out) | 7 (out) |  |  | Cand2,8 | <e-96 |
   Os02g45870.1 | * | -9.73 | 6 (in) | 7 (out) | 7 (out) |  |  |  |  |