From: CpG island density and its correlations with genomic features in mammalian genomes
Common name | Species name | Sequence build | Data source |
---|---|---|---|
Mammal | Â | Â | Â |
   Human | Homo sapiens | 35.1 | NCBI [44] |
   Chimpanzee | Pan troglodytes | 2.1 | NCBI [44] |
   Macaque | Macaca mulatta | 1.1 | NCBI [44] |
   Mouse | Mus musculus | 34.1 | NCBI [44] |
   Rat | Rattus norvegicus | 4.1 | NCBI [44] |
   Dog | Canis familiaris | 2.1 | NCBI [44] |
   Cow | Bos taurus | 3.1 | NCBI [44] |
   Horse | Equus caballus | 1.1 | NCBI [44] |
   Opossum | Monodelphis domestica | 2.1 | NCBI [44] |
Platypus* | Ornithorhynchus anatinus | 1.1 | NCBI [44] |
Non-mammal vertebrate | Â | Â | Â |
   Chicken†| Gallus gallus | 2.1 | NCBI [44] |
   Green anole lizard‡ | Anolis carolinensis | anoCar1 | UCSC [30] |
   Tetraodon | Tetraodon nigroviridis | tetNig1 | UCSC [30] |
   Stickleback | Gasterosteus aculeatus | gasAcu1 | UCSC [30] |
   Medaka | Oryzias latipes | oryLat1 | UCSC [30] |
   Zebrafish | Danio rerio | danRer5 | UCSC [30] |
Fugu‡ | Takifugu rubripes | fr2 | UCSC [30] |