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Table 5 CDSs putatively involved in lignin degradation

From: The genome sequence of the model ascomycete fungus Podospora anserina

  

P. anserina

   
 

Reference

 

Secretion*

N. crassa

M. grisea

A. nidulans

GMC oxidoreductases

[124]

Pa_0_190

+

NCU09798.3

MGG_07580.5

AN2175.3

  

Pa_5_1280

+?

NCU04938.3

MGG_07941.5

AN7998.3

  

Pa_1_15920

+

NCU01853.3

MGG_08438.5

AN4006.3

  

Pa_5_4870

-

NCU07113.3

MGG_10479.5

AN3229.3

  

Pa_4_5130

+

NCU09024.3

MGG_05055.5

AN4212.3

  

Pa_5_5180

+?

NCU08977.3

MGG_10933.5

AN9011.3

  

Pa_6_6430

-?

 

MGG_11204.5

AN7267.3

  

Pa_1_23060

+

 

MGG_12623.5

AN9348.3

  

Pa_6_7550

+

 

MGG_12626.5

AN6445.3

  

Pa_2_7270

+

 

MGG_14477.5

AN7812.3

  

Pa_1_470

+

 

MGG_02127.5

AN1093.3

  

Pa_5_9820

-

 

MGG_09072.5

AN2704.3

  

Pa_6_1080

+

 

MGG_06596.5

AN3531.3

  

Pa_1_24480

-

 

MGG_00779.5

AN7408.3

  

Pa_0_340

-

 

MGG_02371.5

AN1429.3

  

Pa_4_880

+

 

MGG_10948.5

AN8329.3

  

Pa_7_4250

+

 

MGG_11676.5

AN8547.3

  

Pa_5_12190

+

 

MGG_13253.5

AN3206.3

  

Pa_4_4320

+?

 

MGG_11317.5

AN0567.3

  

Pa_3_11130

+?

 

MGG_13583.5

AN3960.3

  

Pa_1_21970

-

 

MGG_08487.5

AN7890.3

  

Pa_3_1060

+

 

MGG_09189.5

AN7832.3

  

Pa_7_4780

+

 

MGG_07569.5

AN7056.3

  

Pa_0_440

+

   
  

Pa_5_4150

+

   
  

Pa_6_11490

+

   
  

Pa_5_12200

+

   
  

Pa_5_13040

-?

   
  

Pa_6_11360

-

   

Cellobiose dehydrogenases

[125]

Pa_7_2650

+

NCU00206.3

MGG_11036.5

AN7230.3

  

Pa_0_280

+

NCU05923.3

MGG_13809.5

 

Pyranose oxidases

[126]

Pa_6_8060

?

-

-

AN5281.3

Galactose oxidases

[127]

Pa_1_18310

+

NCU09209.3

MGG_10878.5

-

     

MGG_12681.5

 

Copper radical oxidases

[128]

Pa_1_7300

+

NCU09267.3

MGG_01655.5

-

     

MGG_05865.5

 

Quinone reductase

[129]

Pa_1_6390

-?

NCU02948.3

MGG_01569.5

AN0297.3

Laccases

[130]

Pa_5_1200

+?

NCU04528.3

MGG_09102.5

AN0901.3

  

Pa_5_4660

+

NCU05113.3

MGG_08523.5

AN6635.3

  

Pa_7_4200

+

NCU05604.3

MGG_07771.5

AN0878.3

  

Pa_5_9860

+

NCU09279.3

MGG_02876.5

AN6830.3

  

Pa_7_3560

+?

NCU02201.3

MGG_09139.5

AN5397.3

  

Pa_6_10630

+

NCU00526.3

MGG_05790.5

AN9170.3

  

Pa_1_15470

+

NCU07920.3

MGG_11608.5

 
  

Pa_6_7880

-

NCU09023.3

MGG_08127.5

 
  

Pa_1_16470

+

 

MGG_13464.5

 
  

Pa_5_4140

?

   

lip/Mn/versatile peroxidases

[70,131]

Pa_1_5970

?

-

MG_07790.5

-

     

MGG_03873.5

 
  1. *Orthologues were identified by the best reciprocal hit method. Putative secretion was evaluated by searching for the presence of a secretion signal peptide with Interproscan or by evaluating the most probable localization with WolfPSORT. In most instances, both methods yielded the same result. '+', protein likely secreted; '-', protein likely not secreted; '?', no firm conclusion could be reached as to the actual localisation. GMC, glucose/methanol/choline.
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Genome Biology

ISSN: 1474-760X

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