Criteria for HCNE detection | Number of HCNEs detected in indicated comparison | ||||
---|---|---|---|---|---|
Minimum identity | Minimum size (bp) | Human vs mouse | Human vs chicken | Human vs zebrafish | Zebrafish vs Tetraodon |
80% over 30 columns | 30 | NC | 125,174 | 19,596 | 57,681 |
90% over 30 columns | 30 | NC | 78,831 | 8,260 | 26,157 |
96% over 30 columns | 30 | 305,015 | 50,478 | 3,656 | 10,205 |
100% | 30 | 150,487 | 35,338 | 1,721 | 4,737 |
70% over 50 columns | 50 | NC | 93,162 | 16,725 | 45,828 |
80% over 50 columns | 50 | NC | 63,304 | 7,169 | 25,997 |
90% over 50 columns | 50 | 265,537 | 36,794 | 3,127 | 8,610 |
95% over 50 columns | 50 | 107,860 | 22,530 | 1,228 | 3,078 |
98% over 50 columns | 50 | 68,600 | 17,579 | 763 | 1,782 |
100% | 50 | 34,785 | 11,934 | 330 | 754 |
90% over 50 columns | 100 | 81,065 | 15,339 | 733 | 1,695 |
95% over 50 columns | 100 | 25,801 | 7,901 | 188 | 450 |
100% | 100 | 4,919 | 2,475 | 20 | 61 |
100% | 200 | 494 | 365 | 0 | 2 |